RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 B4E1Z4 1266 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 KDM4AO75164 1064 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
USP22-208ENST00000578446 GDF11O95390 407 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 FGRP09769 529 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 PSMA5P28066 241 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 NT5C2P49902 561 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 ANAPC15P60006 121 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 ABCB5Q2M3G0 1257 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 TSGA10IPQ3SY00 556 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 FAM47AQ5JRC9 791 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 MOB2Q70IA6 237 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP22-208ENST00000578446 KLRG1Q96E93 195 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 PICK1Q9NRD5 415 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 TACC3Q9Y6A5 838 aa12.6□□□□□ -0.39
USP22-208ENST00000578446 PAPPA2Q9BXP8 1791 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 CTNND1O60716 968 aaKnown RBP12.59□□□□□ -0.39
USP22-208ENST00000578446 GH2P01242 217 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 HMGB1P09429 215 aaKnown RBP12.59□□□□□ -0.39
USP22-208ENST00000578446 AKR1B1P15121 316 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 INPP5BP32019 993 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 CAP2P40123 477 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
USP22-208ENST00000578446 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 TFAP4Q01664 338 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 VGLL4Q14135 290 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
USP22-208ENST00000578446 ADCK5Q3MIX3 580 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 CST9Q5W186 159 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 ANKRD13AQ8IZ07 590 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 SCYL3Q8IZE3 742 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 ZKSCAN4Q969J2 545 aaPredicted RBP12.59□□□□□ -0.39
USP22-208ENST00000578446 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
USP22-208ENST00000578446 ZNF112Q9UJU3 913 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 ZBTB21Q9ULJ3 1066 aa12.59□□□□□ -0.39
USP22-208ENST00000578446 PLIN4Q96Q06 1357 aa12.58□□□□□ -0.4
USP22-208ENST00000578446 UBE2Q2LH0YL09 131 aa12.58□□□□□ -0.4
USP22-208ENST00000578446 ASNSP08243 561 aa12.58□□□□□ -0.4
USP22-208ENST00000578446 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
USP22-208ENST00000578446 RAB3GAP1Q15042 981 aa12.58□□□□□ -0.4
USP22-208ENST00000578446 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
USP22-208ENST00000578446 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
USP22-208ENST00000578446 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.4
USP22-208ENST00000578446 IQCA1Q86XH1 822 aa12.58□□□□□ -0.4
USP22-208ENST00000578446 MB21D2Q8IYB1 491 aaPredicted RBP12.58□□□□□ -0.4
USP22-208ENST00000578446 TMEM88BA6NKF7 163 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 PRC1O43663 620 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 MCM5P33992 734 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 HUNKP57058 714 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 ICA1Q05084 483 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 SEPT2Q15019 361 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 SART3Q15020 963 aaKnown RBP12.57□□□□□ -0.4
USP22-208ENST00000578446 NOL9Q5SY16 702 aaKnown RBP12.57□□□□□ -0.4
USP22-208ENST00000578446 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
USP22-208ENST00000578446 NEDD1Q8NHV4 660 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 ABT1Q9ULW3 272 aaKnown RBP12.57□□□□□ -0.4
USP22-208ENST00000578446 CYP46A1Q9Y6A2 500 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
USP22-208ENST00000578446 POLR2AP24928 1970 aaKnown RBP12.56□□□□□ -0.4
USP22-208ENST00000578446 ERICH2A1L162 156 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 NMT2O60551 498 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 JAG1P78504 1218 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 FGD1P98174 961 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 LDLRAD1Q5T700 205 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 CYB5R4Q7L1T6 521 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 DHX32Q7L7V1 743 aaKnown RBP12.56□□□□□ -0.4
USP22-208ENST00000578446 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 CLMNQ96JQ2 1002 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
USP22-208ENST00000578446 ZKSCAN3Q9BRR0 538 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 UPF3BQ9BZI7 483 aaKnown RBP12.56□□□□□ -0.4
USP22-208ENST00000578446 TM6SF1Q9BZW5 370 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 KANSL2Q9H9L4 492 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 ELP3Q9H9T3 547 aa12.56□□□□□ -0.4
USP22-208ENST00000578446 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.56□□□□□ -0.4
USP22-208ENST00000578446 UNCXA6NJT0 531 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
USP22-208ENST00000578446 CPA1P15085 419 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 PTPRAP18433 802 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 RPS6KB1P23443 525 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 ANTXR2P58335 489 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 CCDC178Q5BJE1 867 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
USP22-208ENST00000578446 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
USP22-208ENST00000578446 IL17RAQ96F46 866 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms