RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 PPP1R13BQ96KQ4 1090 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 DDX41Q9UJV9 622 aaKnown RBP13.14□□□□□ -0.31
GGA3-205ENST00000578348 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 KIAA1551Q9HCM1 1747 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 GOLGA8AA7E2F4 631 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 KIF2AO00139 706 aaPredicted RBP13.14□□□□□ -0.31
GGA3-205ENST00000578348 SLU7O95391 586 aaKnown RBP13.14□□□□□ -0.31
GGA3-205ENST00000578348 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 KMT5BQ4FZB7 885 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
GGA3-205ENST00000578348 PHKBQ93100 1093 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
GGA3-205ENST00000578348 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 FANCCQ00597 558 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 SLC12A7Q9Y666 1083 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
GGA3-205ENST00000578348 NRDCO43847 1150 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 KRT40Q6A162 431 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 SYT10Q6XYQ8 523 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
GGA3-205ENST00000578348 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
GGA3-205ENST00000578348 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 CDC27P30260 824 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 RCAN1P53805 252 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 PNOCQ13519 176 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 WTAPQ15007 396 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 RRP12Q5JTH9 1297 aaKnown RBP13.12□□□□□ -0.31
GGA3-205ENST00000578348 FBXO38Q6PIJ6 1188 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 SHC4Q6S5L8 630 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 TMTC2Q8N394 836 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 SDR42E1Q8WUS8 393 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
GGA3-205ENST00000578348 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 LAMB1P07942 1786 aa13.12□□□□□ -0.31
GGA3-205ENST00000578348 ERICH2A1L162 156 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 IKBKBO14920 756 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 DYNLL1P63167 89 aaKnown RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 HSD3B7Q9H2F3 369 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 PPP6R2O75170 966 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 SERPINC1P01008 464 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 HMGB2P26583 209 aaKnown RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 MECOMQ03112 1051 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 NTRK3Q16288 839 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 PRR5LQ6MZQ0 368 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 ESR2Q92731 530 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 TUBE1Q9UJT0 475 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 HPSEQ9Y251 543 aa13.11□□□□□ -0.31
GGA3-205ENST00000578348 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
GGA3-205ENST00000578348 XDHP47989 1333 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 MINDY4BA8MYZ0 360 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 GYS1P13807 737 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 UBASH3AP57075 661 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 ST5P78524 1137 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 PTPAQ15257 358 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 CFAP100Q494V2 611 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 DPF2Q92785 391 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 UBE2Q2LH0YL09 131 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 MYL5Q02045 173 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 TRIM29Q14134 588 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
GGA3-205ENST00000578348 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 WASF1Q92558 559 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 MAP3K14Q99558 947 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
GGA3-205ENST00000578348 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
GGA3-205ENST00000578348 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
GGA3-205ENST00000578348 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
GGA3-205ENST00000578348 IFNAR1P17181 557 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 KCNJ6P48051 423 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 SSRP1Q08945 709 aaKnown RBP13.09□□□□□ -0.31
GGA3-205ENST00000578348 DHX8Q14562 1220 aaKnown RBP13.09□□□□□ -0.31
GGA3-205ENST00000578348 RTN1Q16799 776 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 LRRN4CLQ8ND94 238 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
GGA3-205ENST00000578348 L2HGDHQ9H9P8 463 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 ANKIB1Q9P2G1 1089 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms