RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 ZNF316A6NFI3 1004 aaPredicted RBP10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 GRIN2CQ14957 1233 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 HHIPL2Q6UWX4 724 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 LINS1Q8NG48 757 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 HOOK2Q96ED9 719 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 MRIQ9BWK5 157 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 AGTPBP1Q9UPW5 1226 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 DOCK1Q14185 1865 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 DOCK2Q92608 1830 aa10.19□□□□□ -0.78
SLC46A1-201ENST00000578217 F6X3S4 739 aa10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 GNAI1P63096 354 aa10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 FLIIQ13045 1269 aa10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 DNAAF4Q8WXU2 420 aa10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 KAZALD1Q96I82 304 aa10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 NECAB3Q96P71 396 aaPredicted RBP10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 TXNRD2Q9NNW7 524 aa10.18□□□□□ -0.78
SLC46A1-201ENST00000578217 TCF20Q9UGU0 1960 aaKnown RBP10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 LOC285556D6RIA3 1793 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 FAM196BA6NMK8 535 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 APAF1O14727 1248 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 EPHB4P54760 987 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 LRRC24Q50LG9 513 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 VGLL2Q8N8G2 317 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 LBHD1Q9BQE6 289 aaPredicted RBP10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 SENP6Q9GZR1 1112 aaPredicted RBP10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 PICK1Q9NRD5 415 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 XIRP2A4UGR9 3374 aa10.17□□□□□ -0.78
SLC46A1-201ENST00000578217 RFX7Q2KHR2 1363 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 RLFQ13129 1914 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 DDTLA6NHG4 134 aaPredicted RBP10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 SPDYE16A6NNV3 312 aaPredicted RBP10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 PRDX5P30044 214 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 SMAD3P84022 425 aaKnown RBP10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 RRP1BQ14684 758 aaKnown RBP10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 CCDC57Q2TAC2 916 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 TAF7LQ5H9L4 462 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 BEND3Q5T5X7 828 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 SH3RF1Q7Z6J0 888 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 ADAMTS19Q8TE59 1207 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 TBC1D22AQ8WUA7 517 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 USP6NLQ92738 828 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 BADQ92934 168 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 ASCC2Q9H1I8 757 aaPredicted RBP10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 MYH16Q9H6N6 1097 aa10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 DDX4Q9NQI0 724 aaKnown RBP10.16□□□□□ -0.78
SLC46A1-201ENST00000578217 FRAT2O75474 233 aaPredicted RBP10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 ITGB8P26012 769 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 RGS3P49796 1198 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 RTP1P59025 263 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 MAP3K10Q02779 954 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 FKBP5Q13451 457 aaPredicted RBP10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 VPS37DQ86XT2 251 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 STK31Q9BXU1 1019 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 USP40Q9NVE5 1235 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 FLRT1Q9NZU1 646 aa10.15□□□□□ -0.78
SLC46A1-201ENST00000578217 TRIM43BA6NCK2 446 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 HMGCS2P54868 508 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 SPP2Q13103 211 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 Q3C1V9 767 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 VARS2Q5ST30 1063 aaKnown RBP10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 KLHDC4Q8TBB5 520 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 PPM1EQ8WY54 764 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 TRIM43Q96BQ3 446 aaPredicted RBP10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 SUCLG2Q96I99 432 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 PORCNQ9H237 461 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 MORF4L1Q9UBU8 362 aa10.14□□□□□ -0.79
SLC46A1-201ENST00000578217 SYNGAP1Q96PV0 1343 aa10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 CTNND1O60716 968 aaKnown RBP10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 XRCC5P13010 732 aaKnown RBP10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 ZKSCAN1P17029 563 aaPredicted RBP10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 TRPV1Q8NER1 839 aa10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 ASB2Q96Q27 587 aa10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 ATP11BQ9Y2G3 1177 aa10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 MYH13Q9UKX3 1938 aa10.13□□□□□ -0.79
SLC46A1-201ENST00000578217 MAST3O60307 1309 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 MYH2Q9UKX2 1941 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 GRM8O00222 908 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 FGFR2P21802 821 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 GCLCP48506 637 aaPredicted RBP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 JAG1P78504 1218 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 SHROOM1Q2M3G4 852 aaPredicted RBP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 TWISTNBQ3B726 338 aaPredicted RBP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 MORN1Q5T089 497 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 PROCA1Q8NCQ7 364 aaPredicted RBP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 UHRF1Q96T88 793 aaPredicted RBP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 P2RX7Q99572 595 aaKnown RBP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 NUDT12Q9BQG2 462 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 PDLIM7Q9NR12 457 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 SUGT1Q9Y2Z0 365 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 LRRFIP2Q9Y608 721 aaKnown RBP10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 NDUFB9Q9Y6M9 179 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 CACNA1AO00555 2505 aa10.12□□□□□ -0.79
SLC46A1-201ENST00000578217 MROH5Q6ZUA9 1318 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 PDE8BO95263 885 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 FOSBP53539 338 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 ADGRE1Q14246 886 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 PDE3AQ14432 1141 aa10.11□□□□□ -0.79
SLC46A1-201ENST00000578217 TRIM60Q495X7 471 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms