RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 RRP1BQ14684 758 aaKnown RBP13.96□□□□□ -0.17
GGA3-204ENST00000578208 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.17
GGA3-204ENST00000578208 CHD1LQ86WJ1 897 aa13.96□□□□□ -0.17
GGA3-204ENST00000578208 STAP2Q9UGK3 403 aa13.96□□□□□ -0.17
GGA3-204ENST00000578208 ZBTB21Q9ULJ3 1066 aa13.96□□□□□ -0.17
GGA3-204ENST00000578208 PRKAB2O43741 272 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 TLR2O60603 784 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 IGHDP01880 384 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 CHGBP05060 677 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 GNAT2P19087 354 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 PLCD1P51178 756 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
GGA3-204ENST00000578208 ABCB5Q2M3G0 1257 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 PROCA1Q8NCQ7 364 aaPredicted RBP13.95□□□□□ -0.18
GGA3-204ENST00000578208 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 EVI5LQ96CN4 794 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 TMOD4Q9NZQ9 345 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 ARPP21Q9UBL0 812 aaPredicted RBP13.95□□□□□ -0.18
GGA3-204ENST00000578208 SWAP70Q9UH65 585 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 SLC45A1Q9Y2W3 748 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
GGA3-204ENST00000578208 GH2P01242 217 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 HMGCS2P54868 508 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 NUCB1Q02818 461 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 MOGSQ13724 837 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 RAB3GAP1Q15042 981 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 GPAT2Q6NUI2 795 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 TATDN1Q6P1N9 297 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 SMCR8Q8TEV9 937 aaPredicted RBP13.94□□□□□ -0.18
GGA3-204ENST00000578208 WDR18Q9BV38 432 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 AGTPBP1Q9UPW5 1226 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
GGA3-204ENST00000578208 CCDC85CA6NKD9 419 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 TRIM6-TRIM34B2RNG4 842 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 USP17L10C9JJH3 530 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 USP17L21D6R901 530 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
GGA3-204ENST00000578208 GPAA1O43292 621 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 APPP05067 770 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 CYP2D6P10635 497 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 OSBPP22059 807 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 SHMT1P34896 483 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 MTMR2Q13614 643 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 FBXO46Q6PJ61 603 aaPredicted RBP13.93□□□□□ -0.18
GGA3-204ENST00000578208 OSBP2Q969R2 916 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 STRBPQ96SI9 672 aaKnown RBP13.93□□□□□ -0.18
GGA3-204ENST00000578208 FEZ1Q99689 392 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 CPA4Q9UI42 421 aa13.93□□□□□ -0.18
GGA3-204ENST00000578208 C19orf81C9J6K1 198 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 M0R2C6 588 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 TDO2P48775 406 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 BACE1P56817 501 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 GABPAQ06546 454 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 C12orf60Q5U649 245 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 GIMAP6Q6P9H5 292 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 NACAP1Q9BZK3 213 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 PTPRFP10586 1907 aa13.92□□□□□ -0.18
GGA3-204ENST00000578208 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 CYP2C8P10632 490 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 USP14P54578 494 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 IRX3P78415 501 aaPredicted RBP13.91□□□□□ -0.18
GGA3-204ENST00000578208 JAG1P78504 1218 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 SHROOM1Q2M3G4 852 aaPredicted RBP13.91□□□□□ -0.18
GGA3-204ENST00000578208 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 TREML2Q5T2D2 321 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 USP17L2Q6R6M4 530 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 C17orf99Q6UX52 265 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 OTOP1Q7RTM1 612 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 RILPL2Q969X0 211 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 DYNLL2Q96FJ2 89 aa13.91□□□□□ -0.18
GGA3-204ENST00000578208 ADGRA2Q96PE1 1338 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 CDK8P49336 464 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 LACTBP83111 547 aaPredicted RBP13.9□□□□□ -0.18
GGA3-204ENST00000578208 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 TMEM179Q6ZVK1 233 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 C16orf86Q6ZW13 317 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 TICAM2Q86XR7 235 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 SLC44A5Q8NCS7 719 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 CCDC17Q96LX7 622 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 ZNF287Q9HBT7 754 aa13.9□□□□□ -0.18
GGA3-204ENST00000578208 BAZ2AQ9UIF9 1905 aaKnown RBP13.9□□□□□ -0.18
GGA3-204ENST00000578208 GSG1L2A8MUP6 293 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 MINDY4BA8MYZ0 360 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 PATL2C9JE40 543 aaKnown RBP13.89□□□□□ -0.19
GGA3-204ENST00000578208 GNRH1P01148 92 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 EVX2Q03828 476 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 ZYXQ15942 572 aaKnown RBP13.89□□□□□ -0.19
GGA3-204ENST00000578208 SBK1Q52WX2 424 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 SEC62Q99442 399 aaKnown RBP13.89□□□□□ -0.19
GGA3-204ENST00000578208 NAPBQ9H115 298 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 SH2D4AQ9H788 454 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 HPS5Q9UPZ3 1129 aa13.89□□□□□ -0.19
GGA3-204ENST00000578208 FMNL1O95466 1100 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms