RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 RAET1EQ8TD07 263 aa12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 GTF3C2Q8WUA4 911 aaPredicted RBP12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 FEZ1Q99689 392 aa12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 WDR18Q9BV38 432 aa12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 CABP5Q9NP86 173 aa12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 MYPNQ86TC9 1320 aa12.28□□□□□ -0.44
SUPT6H-204ENST00000577939 C19orf81C9J6K1 198 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 ERC2O15083 957 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 CYP2C8P10632 490 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 BCRP11274 1271 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 HMGCS2P54868 508 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 MTMR2Q13614 643 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 AAMPQ13685 434 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 FAM110CQ1W6H9 321 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 RIOK1Q9BRS2 568 aaKnown RBP12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 SRRDQ9UH36 339 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 PTCH2Q9Y6C5 1203 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 BRCA2P51587 3418 aa12.27□□□□□ -0.45
SUPT6H-204ENST00000577939 USP17L10C9JJH3 530 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 MBD4O95243 580 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 GDF11O95390 407 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 ADD2P35612 726 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 USP14P54578 494 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 BACE1P56817 501 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 UBE3CQ15386 1083 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 DCTPP1Q9H773 170 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 DNAJC18Q9H819 358 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 ATP8A2Q9NTI2 1148 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 SWAP70Q9UH65 585 aa12.26□□□□□ -0.45
SUPT6H-204ENST00000577939 MYH4Q9Y623 1939 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 MKI67P46013 3256 aaKnown RBP12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 GH2P01242 217 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 ZFYP08048 801 aaPredicted RBP12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 UBXN2AP68543 259 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 ABCB5Q2M3G0 1257 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 CERKLQ49MI3 558 aaPredicted RBP12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 USP17L2Q6R6M4 530 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 CCDC84Q86UT8 332 aaPredicted RBP12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 COA7Q96BR5 231 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 ZNF333Q96JL9 665 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 TRIM47Q96LD4 638 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 ARHGAP39Q9C0H5 1083 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 TTC41PQ6P2S7 1318 aa12.25□□□□□ -0.45
SUPT6H-204ENST00000577939 TCRBV5S4A2TA0A5A2 114 aa12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 SMARCA5O60264 1052 aaPredicted RBP12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 SLURP2P0DP57 97 aa12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 TREML2Q5T2D2 321 aa12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 LCORLQ8N3X6 602 aa12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 SH2D4AQ9H788 454 aa12.24□□□□□ -0.45
SUPT6H-204ENST00000577939 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 PARP14Q460N5 1801 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 MPHOSPH10O00566 681 aaKnown RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 GRK4P32298 578 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 CCAR1Q8IX12 1150 aaKnown RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 ANKRD13CQ8N6S4 541 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 KBTBD3Q8NAB2 608 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 SDR42E1Q8WUS8 393 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 ARMT1Q9H993 441 aa12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 CWC22Q9HCG8 908 aaKnown RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 DCP1AQ9NPI6 582 aaPredicted RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 ARPP21Q9UBL0 812 aaPredicted RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
SUPT6H-204ENST00000577939 GREB1LQ9C091 1923 aaPredicted RBP12.22□□□□□ -0.45
SUPT6H-204ENST00000577939 GNAT2P19087 354 aa12.22□□□□□ -0.45
SUPT6H-204ENST00000577939 HOXA7P31268 230 aaPredicted RBP12.22□□□□□ -0.45
SUPT6H-204ENST00000577939 PRKCZQ05513 592 aa12.22□□□□□ -0.45
SUPT6H-204ENST00000577939 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
SUPT6H-204ENST00000577939 GCC1Q96CN9 775 aa12.22□□□□□ -0.45
SUPT6H-204ENST00000577939 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
SUPT6H-204ENST00000577939 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 CAPN2P17655 700 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 SHMT1P34896 483 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 HERVK_113P62684 666 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 CCNA1P78396 465 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 RRP1BQ14684 758 aaKnown RBP12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 APPBP2Q92624 585 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 CCDC17Q96LX7 622 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 KIAA1683Q9H0B3 1180 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
SUPT6H-204ENST00000577939 CEP290O15078 2479 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms