RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 HERC5Q9UII4 1024 aaKnown RBP19.51■□□□□ 0.71
VAPA-204ENST00000577901 DBNLQ9UJU6 430 aaKnown RBP19.51■□□□□ 0.71
VAPA-204ENST00000577901 LOC285556D6RIA3 1793 aa19.5■□□□□ 0.71
VAPA-204ENST00000577901 CRBNQ96SW2 442 aa19.5■□□□□ 0.71
VAPA-204ENST00000577901 PRO3102Q9H379 93 aa19.5■□□□□ 0.71
VAPA-204ENST00000577901 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
VAPA-204ENST00000577901 PI4KBQ9UBF8 816 aa19.5■□□□□ 0.71
VAPA-204ENST00000577901 BAG3O95817 575 aa19.49■□□□□ 0.71
VAPA-204ENST00000577901 SH3D19Q5HYK7 790 aa19.49■□□□□ 0.71
VAPA-204ENST00000577901 NAA16Q6N069 864 aaPredicted RBP19.49■□□□□ 0.71
VAPA-204ENST00000577901 CRISPLD2Q9H0B8 497 aa19.49■□□□□ 0.71
VAPA-204ENST00000577901 ASCC2Q9H1I8 757 aaPredicted RBP19.49■□□□□ 0.71
VAPA-204ENST00000577901 SNRKQ9NRH2 765 aa19.49■□□□□ 0.71
VAPA-204ENST00000577901 AATFQ9NY61 560 aaKnown RBP eCLIP19.49■□□□□ 0.71
VAPA-204ENST00000577901 EVI5O60447 810 aa19.48■□□□□ 0.71
VAPA-204ENST00000577901 IFIT2P09913 472 aaKnown RBP19.48■□□□□ 0.71
VAPA-204ENST00000577901 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.48■□□□□ 0.713e-10■■■■■ 28.4
VAPA-204ENST00000577901 DHX36Q9H2U1 1008 aaKnown RBP19.48■□□□□ 0.71
VAPA-204ENST00000577901 TLR7Q9NYK1 1049 aaKnown RBP19.48■□□□□ 0.71
VAPA-204ENST00000577901 TRIOBPQ9H2D6 2365 aa19.47■□□□□ 0.71
VAPA-204ENST00000577901 ATAD5Q96QE3 1844 aa19.47■□□□□ 0.71
VAPA-204ENST00000577901 PLCG2P16885 1265 aa19.47■□□□□ 0.71
VAPA-204ENST00000577901 TGFBRAP1Q8WUH2 860 aa19.47■□□□□ 0.71
VAPA-204ENST00000577901 WDR18Q9BV38 432 aa19.47■□□□□ 0.71
VAPA-204ENST00000577901 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
VAPA-204ENST00000577901 GJD2Q9UKL4 321 aa19.47■□□□□ 0.71
VAPA-204ENST00000577901 HMGCRP04035 888 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 ASNSP08243 561 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 PPP4CP60510 307 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 MTMR2Q13614 643 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 MAPKAPK5Q8IW41 473 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 PAWRQ96IZ0 340 aaKnown RBP19.46■□□□□ 0.71
VAPA-204ENST00000577901 LRRCC1Q9C099 1032 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 DCTPP1Q9H773 170 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 TMOD4Q9NZQ9 345 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 MORF4L1Q9UBU8 362 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
VAPA-204ENST00000577901 IGSF3O75054 1194 aa19.45■□□□□ 0.7
VAPA-204ENST00000577901 CYP2E1P05181 493 aaPredicted RBP19.45■□□□□ 0.7
VAPA-204ENST00000577901 BACE1P56817 501 aa19.45■□□□□ 0.7
VAPA-204ENST00000577901 IRX3P78415 501 aaPredicted RBP19.45■□□□□ 0.7
VAPA-204ENST00000577901 JAG1P78504 1218 aa19.45■□□□□ 0.7
VAPA-204ENST00000577901 AAMPQ13685 434 aa19.45■□□□□ 0.7
VAPA-204ENST00000577901 NECAB2Q7Z6G3 386 aa19.45■□□□□ 0.7
VAPA-204ENST00000577901 ADGRA1Q86SQ6 560 aa19.45■□□□□ 0.7
VAPA-204ENST00000577901 FOXP4Q8IVH2 680 aaPredicted RBP19.45■□□□□ 0.7
VAPA-204ENST00000577901 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
VAPA-204ENST00000577901 FLT1P17948 1338 aa19.45■□□□□ 0.7
VAPA-204ENST00000577901 MAST2Q6P0Q8 1798 aa19.44■□□□□ 0.7
VAPA-204ENST00000577901 METTL16Q86W50 562 aaKnown RBP19.44■□□□□ 0.7
VAPA-204ENST00000577901 CRACR2BQ8N4Y2 399 aaPredicted RBP19.44■□□□□ 0.7
VAPA-204ENST00000577901 DIS3LQ8TF46 1054 aaKnown RBP19.44■□□□□ 0.7
VAPA-204ENST00000577901 TRIM34Q9BYJ4 488 aa19.44■□□□□ 0.7
VAPA-204ENST00000577901 DNAJC18Q9H819 358 aa19.44■□□□□ 0.7
VAPA-204ENST00000577901 PALD1Q9ULE6 856 aa19.44■□□□□ 0.7
VAPA-204ENST00000577901 SIPA1L1O43166 1804 aa19.44■□□□□ 0.7
VAPA-204ENST00000577901 HOXA7P31268 230 aaPredicted RBP19.43■□□□□ 0.7
VAPA-204ENST00000577901 ZAP70P43403 619 aa19.43■□□□□ 0.7
VAPA-204ENST00000577901 TRIM32Q13049 653 aa19.43■□□□□ 0.7
VAPA-204ENST00000577901 ANKLE1Q8NAG6 615 aa19.43■□□□□ 0.7
VAPA-204ENST00000577901 P2RX7Q99572 595 aaKnown RBP19.43■□□□□ 0.7
VAPA-204ENST00000577901 HMX1Q9NP08 348 aaPredicted RBP19.43■□□□□ 0.7
VAPA-204ENST00000577901 RPTORQ8N122 1335 aa19.43■□□□□ 0.7
VAPA-204ENST00000577901 A0A1W2PPC1 479 aa19.42■□□□□ 0.7
VAPA-204ENST00000577901 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
VAPA-204ENST00000577901 SHROOM1Q2M3G4 852 aaPredicted RBP19.42■□□□□ 0.7
VAPA-204ENST00000577901 PIH1D3Q9NQM4 214 aaKnown RBP19.42■□□□□ 0.7
VAPA-204ENST00000577901 GINM1Q9NU53 330 aa19.42■□□□□ 0.7
VAPA-204ENST00000577901 SAP30BPQ9UHR5 308 aaKnown RBP19.42■□□□□ 0.7
VAPA-204ENST00000577901 USP17L10C9JJH3 530 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 PEX10O60683 326 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 GDF11O95390 407 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 HERVK_113P62684 666 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 GPRC5AQ8NFJ5 357 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.41■□□□□ 0.7
VAPA-204ENST00000577901 TRIB2Q92519 343 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 TXNRD2Q9NNW7 524 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 STAP2Q9UGK3 403 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 ZBTB21Q9ULJ3 1066 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 DOCK3Q8IZD9 2030 aa19.41■□□□□ 0.7
VAPA-204ENST00000577901 HLA-DOAP06340 250 aa19.4■□□□□ 0.7
VAPA-204ENST00000577901 CYP2B6P20813 491 aa19.4■□□□□ 0.7
VAPA-204ENST00000577901 LAMA3Q16787 3333 aa19.4■□□□□ 0.7
VAPA-204ENST00000577901 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.69
VAPA-204ENST00000577901 CYP7A1P22680 504 aa19.39■□□□□ 0.69
VAPA-204ENST00000577901 DYNLL1P63167 89 aaKnown RBP19.39■□□□□ 0.69
VAPA-204ENST00000577901 TTF1Q15361 905 aaPredicted RBP19.39■□□□□ 0.69
VAPA-204ENST00000577901 C7orf61Q8IZ16 206 aa19.39■□□□□ 0.69
VAPA-204ENST00000577901 SOCS4Q8WXH5 440 aa19.39■□□□□ 0.69
VAPA-204ENST00000577901 NUDT12Q9BQG2 462 aa19.39■□□□□ 0.69
VAPA-204ENST00000577901 NBPF3Q9H094 633 aa19.39■□□□□ 0.69
VAPA-204ENST00000577901 RBPJLQ9UBG7 517 aa19.39■□□□□ 0.69
VAPA-204ENST00000577901 PLXNB2O15031 1838 aa19.39■□□□□ 0.69
VAPA-204ENST00000577901 IDH1O75874 414 aaKnown RBP19.38■□□□□ 0.69
VAPA-204ENST00000577901 XRCC5P13010 732 aaKnown RBP19.38■□□□□ 0.69
VAPA-204ENST00000577901 MAPK4P31152 587 aa19.38■□□□□ 0.69
VAPA-204ENST00000577901 MNX1P50219 401 aaPredicted RBP19.38■□□□□ 0.69
VAPA-204ENST00000577901 MAP3K12Q12852 859 aa19.38■□□□□ 0.69
VAPA-204ENST00000577901 FOCADQ5VW36 1801 aa19.38■□□□□ 0.69
VAPA-204ENST00000577901 EMILIN3Q9NT22 766 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms