RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 IFT74Q96LB3 600 aa11.6□□□□□ -0.55
PTPRM-205ENST00000577827 SELENOSQ9BQE4 189 aa11.6□□□□□ -0.55
PTPRM-205ENST00000577827 ZKSCAN3Q9BRR0 538 aa11.6□□□□□ -0.55
PTPRM-205ENST00000577827 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
PTPRM-205ENST00000577827 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
PTPRM-205ENST00000577827 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
PTPRM-205ENST00000577827 A0A1W2PRG0 241 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 RPL13P26373 211 aaKnown RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 USP37Q86T82 979 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 SYCP3Q8IZU3 236 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 MIGA1Q8NAN2 632 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 SCLT1Q96NL6 688 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 GSDMAQ96QA5 445 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 PDE11AQ9HCR9 933 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 CLTCL1P53675 1640 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 ARID5AQ03989 594 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 CLUL1Q15846 466 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 CCDC65Q8IXS2 484 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 LPIN2Q92539 896 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 SEC62Q99442 399 aaKnown RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 BPIFA3Q9BQP9 254 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 C19orf44Q9H6X5 657 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 CFAP74Q9C0B2 1584 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 NUTM2BA6NNL0 878 aaPredicted RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 NUTM2EB1AL46 878 aaPredicted RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 KRT13P13646 458 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 ATP5DP30049 168 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 ZAP70P43403 619 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 ENOX1Q8TC92 643 aaKnown RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 UBLCP1Q8WVY7 318 aaPredicted RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 CABS1Q96KC9 395 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 ALDH8A1Q9H2A2 487 aaPredicted RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 EFCAB6Q5THR3 1501 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 CFAP65Q6ZU64 1925 aaKnown RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 FBF1Q8TES7 1133 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 DBNLQ9UJU6 430 aaKnown RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 MTUS1Q9ULD2 1270 aa11.59□□□□□ -0.55
PTPRM-205ENST00000577827 RRP15Q9Y3B9 282 aaKnown RBP11.59□□□□□ -0.55
PTPRM-205ENST00000577827 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 ACTN4O43707 911 aaKnown RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 ITGA6P23229 1130 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 LACTBP83111 547 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 KCNJ12Q14500 433 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 IFIH1Q9BYX4 1025 aaKnown RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 MLH3Q9UHC1 1453 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 TRAF5O00463 557 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 KCNJ14Q9UNX9 436 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 HYOU1Q9Y4L1 999 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 ZFYVE16Q7Z3T8 1539 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 FGAP02671 866 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 HLA-DOAP06340 250 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 KCNA6P17658 529 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 EFCAB13Q8IY85 973 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 DENND2AQ9ULE3 1009 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 HPDP32754 393 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 ADD1P35611 737 aaKnown RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 CALCOCO2Q13137 446 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 MORC3Q14149 939 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 CCDC6Q16204 474 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 HS2ST1Q7LGA3 356 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 ZNF589Q86UQ0 364 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 ZNF496Q96IT1 587 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-205ENST00000577827 CAPS2Q9BXY5 557 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
PTPRM-205ENST00000577827 ZNF532Q9HCE3 1301 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 IL2RBP14784 551 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 PLCG2P16885 1265 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 KIF23Q02241 960 aaPredicted RBP11.57□□□□□ -0.56
PTPRM-205ENST00000577827 RAPGEF1Q13905 1077 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 ZNF594Q96JF6 807 aaPredicted RBP11.57□□□□□ -0.56
PTPRM-205ENST00000577827 ARMT1Q9H993 441 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 TLDC2A0PJX2 215 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 ATP2A1O14983 1001 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 PDE8AO60658 829 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 MAP2K2P36507 400 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 SETDB1Q15047 1291 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 PANX2Q96RD6 677 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 MYL10Q9BUA6 226 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 PARD6BQ9BYG5 372 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 FOXP1Q9H334 677 aaPredicted RBP11.57□□□□□ -0.56
PTPRM-205ENST00000577827 MCM9Q9NXL9 1143 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 MAPK8IP1Q9UQF2 711 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 CTNNA2P26232 953 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 KCNJ6P48051 423 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 GNGT1P63211 74 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 DZIP3Q86Y13 1208 aaKnown RBP11.57□□□□□ -0.56
PTPRM-205ENST00000577827 ZNF654Q8IZM8 581 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 BCAS4Q8TDM0 211 aa11.57□□□□□ -0.56
PTPRM-205ENST00000577827 FAM89AQ96GI7 184 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms