RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TEX11Q8IYF3 940 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 NACAP1Q9BZK3 213 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ANAPC4Q9UJX5 808 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 FOCADQ5VW36 1801 aa13.27□□□□□ -0.28
CDK5RAP3-204ENST00000577664 FGRP09769 529 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 HSPA4P34932 840 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 NF2P35240 595 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 NT5C2P49902 561 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 MAP3K10Q02779 954 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TTLL12Q14166 644 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ARMC9Q7Z3E5 817 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 NKX2-3Q8TAU0 364 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TGFBRAP1Q8WUH2 860 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 FAM151AQ8WW52 585 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 EPB41L4AQ9HCS5 686 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ATRNL1Q5VV63 1379 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.29
CDK5RAP3-204ENST00000577664 FLT1P17948 1338 aa13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 RBM25P49756 843 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 CTR9Q6PD62 1173 aa13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 IL27Q8NEV9 243 aa13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 SDR42E1Q8WUS8 393 aa13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 GDF15Q99988 308 aa13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 OSBPL5Q9H0X9 879 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 DHX36Q9H2U1 1008 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-204ENST00000577664 CDK5RAP2Q96SN8 1893 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 USP5P45974 858 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ANAPC15P60006 121 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 NFIAQ12857 509 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TNFAIP1Q13829 316 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 MAP3K11Q16584 847 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 C12orf60Q5U649 245 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 OTUD7BQ6GQQ9 843 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 DDRGK1Q96HY6 314 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TMOD2Q9NZR1 351 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ARPP21Q9UBL0 812 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 PPP2R3BQ9Y5P8 575 aa13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 RBM8AQ9Y5S9 174 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-204ENST00000577664 EYSQ5T1H1 3165 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 UNCXA6NJT0 531 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 USP17L12C9JPN9 530 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 USP17L21D6R901 530 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TBC1D12O60347 775 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 APPP05067 770 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 GJA8P48165 433 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TNNI2P48788 182 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 FOXP4Q8IVH2 680 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 SH3TC2Q8TF17 1288 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 NAPBQ9H115 298 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 EHD4Q9H223 541 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 SSC5DA1L4H1 1573 aa13.24□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ROBO3Q96MS0 1386 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 DDX60LQ5H9U9 1706 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ZNF213O14771 459 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 CYP21A2P08686 494 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 GABPAQ06546 454 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 IMMTQ16891 758 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 CREB3L3Q68CJ9 461 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 SH3BP5LQ7L8J4 393 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 MAPKAPK5Q8IW41 473 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 ZFPM1Q8IX07 1006 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 WNK4Q96J92 1243 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TEPSINQ96N21 525 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 MCM9Q9NXL9 1143 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 PI4KBQ9UBF8 816 aa13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 SCAF8Q9UPN6 1271 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-204ENST00000577664 RPTORQ8N122 1335 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 CLRN2A0PK11 232 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 SLC27A2O14975 620 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TDO2P48775 406 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 RASA3Q14644 834 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TBC1D32Q96NH3 1257 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 PTPN18Q99952 460 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 C22orf23Q9BZE7 217 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 DEFB129Q9H1M3 183 aa13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-204ENST00000577664 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 MYCP01106 439 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 GJB1P08034 283 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 PLCD1P51178 756 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 CACNB3P54284 484 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 PPARAQ07869 468 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 MTFR1Q15390 333 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 TM6SF1Q9BZW5 370 aa13.21□□□□□ -0.29
CDK5RAP3-204ENST00000577664 NBPF3Q9H094 633 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms