RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GOLGA6BA6NDN3 693 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 BAG3O95817 575 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 TMEM132AQ24JP5 1023 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 NBPF5PQ86XG9 351 aaPredicted RBP20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 PLA2G4DQ86XP0 818 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 SPATA5Q8NB90 893 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 ATP1A2P50993 1020 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 CSRNP2Q9H175 543 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 LRRC7Q96NW7 1537 aa20.08■□□□□ 0.8
ATPAF1-214ENST00000576409 AP5Z1O43299 807 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 PHKG2P15735 406 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 GNAT2P19087 354 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 KLHL7Q8IXQ5 586 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 FANCBQ8NB91 859 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 PUM3Q15397 648 aaKnown RBP20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 C8orf74Q6P047 294 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 POLR3EQ9NVU0 708 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 FAN1Q9Y2M0 1017 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 MAGEA1P43355 309 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 BCAMP50895 628 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 CADPS2Q86UW7 1296 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 KLHL34Q8N239 644 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 SCLT1Q96NL6 688 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 SAR1BQ9Y6B6 198 aa20.07■□□□□ 0.8
ATPAF1-214ENST00000576409 PRKAB2O43741 272 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 TMEM2Q9UHN6 1383 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 TMEM110-MUSTN1A8MSY1 372 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 USP17L12C9JPN9 530 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 USP17L21D6R901 530 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 STX10O60499 249 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 CDC25BP30305 580 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 RBL2Q08999 1139 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 KIAA0753Q2KHM9 967 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 IRX2Q9BZI1 471 aaPredicted RBP20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 GREM2Q9H772 168 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 CPLX4Q7Z7G2 160 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 CCDC114Q96M63 670 aa20.06■□□□□ 0.8
ATPAF1-214ENST00000576409 KRT13P13646 458 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 ZSCAN20P17040 1043 aaPredicted RBP20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 PTGDRQ13258 359 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 KRT79Q5XKE5 535 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 SELENOSQ9BQE4 189 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 RTL9Q8NET4 1388 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 LIG3P49916 1009 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 OR8K1Q8NGG5 319 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 TCIRG1Q13488 830 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 CCDC25Q86WR0 208 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 SYMPKQ92797 1274 aaKnown RBP20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 GUCY2FP51841 1108 aa20.05■□□□□ 0.8
ATPAF1-214ENST00000576409 DCAF17Q5H9S7 520 aaPredicted RBP20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 UBLCP1Q8WVY7 318 aaPredicted RBP20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 SECISBP2LQ93073 1101 aaKnown RBP20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 EPSTI1Q96J88 318 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 PAIP2Q9BPZ3 127 aaKnown RBP20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 ATP10DQ9P241 1426 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 KCNJ18B7U540 433 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 KCNJ12Q14500 433 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 PLS1Q14651 629 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 STOX1Q6ZVD7 989 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 SYCP3Q8IZU3 236 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 TNKSO95271 1327 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 NCOA3Q9Y6Q9 1424 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 FOXN1O15353 648 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 CALM1P0DP23 149 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 CALM2P0DP24 149 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 CALM3P0DP25 149 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 BRD3Q15059 726 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 MEX3CQ5U5Q3 659 aaKnown RBP20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 KCTD16Q68DU8 428 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 MAP3K4Q9Y6R4 1608 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 ZMYM6O95789 1325 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
ATPAF1-214ENST00000576409 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 USP6P35125 1406 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 BICDL2A1A5D9 508 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 CCNT1O60563 726 aaKnown RBP20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 NELFCDQ8IXH7 590 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 RASGRP4Q8TDF6 673 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 LPIN2Q92539 896 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 RABGGTAQ92696 567 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 CDC23Q9UJX2 597 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 CPSF1Q10570 1443 aaKnown RBP20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 GYG1P46976 350 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 RRAGAQ7L523 313 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 GPKOWQ92917 476 aaPredicted RBP eCLIP20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 EPN1Q9Y6I3 576 aaPredicted RBP20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 SYNE4Q8N205 404 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 DPF2Q92785 391 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 NLRP3Q96P20 1036 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 C6orf50Q9HD87 102 aa20.03■□□□□ 0.8
ATPAF1-214ENST00000576409 TUBBP07437 444 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 MAN1B1Q9UKM7 699 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 MED14O60244 1454 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms