RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 COL2A1P02458 1487 aaPredicted RBP20.16■□□□□ 0.82
CTDNEP1-211ENST00000575783 LDHCP07864 332 aa20.15■□□□□ 0.82
CTDNEP1-211ENST00000575783 JAG1P78504 1218 aa20.15■□□□□ 0.82
CTDNEP1-211ENST00000575783 MFSD14CQ5VZR4 134 aa20.15■□□□□ 0.82
CTDNEP1-211ENST00000575783 TEX11Q8IYF3 940 aa20.15■□□□□ 0.82
CTDNEP1-211ENST00000575783 EDC3Q96F86 508 aaKnown RBP20.15■□□□□ 0.82
CTDNEP1-211ENST00000575783 ATP11BQ9Y2G3 1177 aa20.15■□□□□ 0.82
CTDNEP1-211ENST00000575783 MYH2Q9UKX2 1941 aa20.15■□□□□ 0.82
CTDNEP1-211ENST00000575783 MUC3AQ02505 3323 aa20.14■□□□□ 0.82
CTDNEP1-211ENST00000575783 PLXNB2O15031 1838 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 PDS5AQ29RF7 1337 aaKnown RBP20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 C19orf81C9J6K1 198 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 USP17L10C9JJH3 530 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 ZBTB22O15209 634 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 ASNSP08243 561 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 UBTFL1P0CB47 393 aaPredicted RBP20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 RTP1P59025 263 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 GSTO1P78417 241 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 MAP2K5Q13163 448 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 C9orf50Q5SZB4 431 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 WDR78Q5VTH9 848 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 TBC1D9Q6ZT07 1266 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 RAI14Q9P0K7 980 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 PI4KBQ9UBF8 816 aa20.14■□□□□ 0.81
CTDNEP1-211ENST00000575783 MAP4K4O95819 1239 aaPredicted RBP20.13■□□□□ 0.81
CTDNEP1-211ENST00000575783 NSUN4Q96CB9 384 aaKnown RBP20.13■□□□□ 0.81
CTDNEP1-211ENST00000575783 XAGE2Q96GT9 111 aa20.13■□□□□ 0.81
CTDNEP1-211ENST00000575783 PRDM5Q9NQX1 630 aaPredicted RBP20.13■□□□□ 0.81
CTDNEP1-211ENST00000575783 FLRT1Q9NZU1 646 aa20.13■□□□□ 0.81
CTDNEP1-211ENST00000575783 DDX20Q9UHI6 824 aaKnown RBP20.13■□□□□ 0.81
CTDNEP1-211ENST00000575783 LOC285556D6RIA3 1793 aa20.13■□□□□ 0.81
CTDNEP1-211ENST00000575783 FOSL2P15408 326 aa20.12■□□□□ 0.81
CTDNEP1-211ENST00000575783 SHROOM1Q2M3G4 852 aaPredicted RBP20.12■□□□□ 0.81
CTDNEP1-211ENST00000575783 POTEEQ6S8J3 1075 aa20.12■□□□□ 0.81
CTDNEP1-211ENST00000575783 SH3RF3Q8TEJ3 882 aaPredicted RBP20.12■□□□□ 0.81
CTDNEP1-211ENST00000575783 SSH1Q8WYL5 1049 aa20.12■□□□□ 0.81
CTDNEP1-211ENST00000575783 LPAR1Q92633 364 aa20.12■□□□□ 0.81
CTDNEP1-211ENST00000575783 TTYH1Q9H313 450 aaPredicted RBP20.12■□□□□ 0.81
CTDNEP1-211ENST00000575783 A0A1B0GUL7 405 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 GLRX3O76003 335 aaKnown RBP20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 GDF11O95390 407 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 ATP2B2Q01814 1243 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 MVPQ14764 893 aaKnown RBP20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 GJC2Q5T442 439 aaPredicted RBP20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 PI16Q6UXB8 463 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 GTF3C2Q8WUA4 911 aaPredicted RBP20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 BADQ92934 168 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 NEUROD6Q96NK8 337 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 TRIM34Q9BYJ4 488 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 HMG20BQ9P0W2 317 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 TTC28Q96AY4 2481 aa20.11■□□□□ 0.81
CTDNEP1-211ENST00000575783 DNM1LO00429 736 aa20.1■□□□□ 0.81
CTDNEP1-211ENST00000575783 MSCO60682 206 aa20.1■□□□□ 0.81
CTDNEP1-211ENST00000575783 COL9A1P20849 921 aa20.1■□□□□ 0.81
CTDNEP1-211ENST00000575783 CRACR2BQ8N4Y2 399 aaPredicted RBP20.1■□□□□ 0.81
CTDNEP1-211ENST00000575783 DHX36Q9H2U1 1008 aaKnown RBP20.1■□□□□ 0.81
CTDNEP1-211ENST00000575783 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
CTDNEP1-211ENST00000575783 MYCNP04198 464 aaPredicted RBP20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 CYP2C19P33261 490 aa20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 CCNA1P78396 465 aa20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 SMAD3P84022 425 aaKnown RBP20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 TFCP2Q12800 502 aa20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 GORABQ5T7V8 394 aa20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 SPATA5Q8NB90 893 aa20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 NOL10Q9BSC4 688 aaKnown RBP20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 COPRSQ9NQ92 184 aa20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 AKAP2Q9Y2D5 859 aa20.09■□□□□ 0.81
CTDNEP1-211ENST00000575783 USP17L2Q6R6M4 530 aa20.08■□□□□ 0.81
CTDNEP1-211ENST00000575783 SLC39A5Q6ZMH5 540 aa20.08■□□□□ 0.81
CTDNEP1-211ENST00000575783 MAPKAPK5Q8IW41 473 aa20.08■□□□□ 0.81
CTDNEP1-211ENST00000575783 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.81
CTDNEP1-211ENST00000575783 RABGAP1Q9Y3P9 1069 aa20.08■□□□□ 0.81
CTDNEP1-211ENST00000575783 SLC15A5A6NIM6 579 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 CNMDO75829 334 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 PTPREP23469 700 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 ZYXQ15942 572 aaKnown RBP20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 FOXP4Q8IVH2 680 aaPredicted RBP20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 ARRDC4Q8NCT1 418 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 TRPV1Q8NER1 839 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 TGFBRAP1Q8WUH2 860 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 AATFQ9NY61 560 aaKnown RBP eCLIP20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 ZBTB21Q9ULJ3 1066 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 IVNS1ABPQ9Y6Y0 642 aa20.07■□□□□ 0.8
CTDNEP1-211ENST00000575783 TRIM60Q495X7 471 aa20.06■□□□□ 0.8
CTDNEP1-211ENST00000575783 ANO1Q5XXA6 986 aa20.06■□□□□ 0.8
CTDNEP1-211ENST00000575783 NPLOC4Q8TAT6 608 aa20.06■□□□□ 0.8
CTDNEP1-211ENST00000575783 PALD1Q9ULE6 856 aa20.06■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L15C9J2P7 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L13C9JLJ4 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 KBTBD13C9JR72 458 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L11C9JVI0 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L18D6R9N7 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L22D6RA61 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L17D6RBQ6 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L19D6RCP7 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L20D6RJB6 530 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 BAG3O95817 575 aa20.05■□□□□ 0.8
CTDNEP1-211ENST00000575783 USP17L24Q0WX57 530 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms