RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
RPAIN-217ENST00000575711 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
RPAIN-217ENST00000575711 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
RPAIN-217ENST00000575711 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
RPAIN-217ENST00000575711 RNF41Q9H4P4 317 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-217ENST00000575711 CABP5Q9NP86 173 aa16.6■□□□□ 0.25
RPAIN-217ENST00000575711 RBM8AQ9Y5S9 174 aaKnown RBP16.6■□□□□ 0.25
RPAIN-217ENST00000575711 SPDYE5A6NIY4 337 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
RPAIN-217ENST00000575711 SLC10A3P09131 477 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 PCP11498 1178 aaKnown RBP16.59■□□□□ 0.25
RPAIN-217ENST00000575711 GRM1Q13255 1194 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 CYP4F22Q6NT55 531 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 RASAL3Q86YV0 1011 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 ZNF444Q8N0Y2 327 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-217ENST00000575711 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
RPAIN-217ENST00000575711 OTOFQ9HC10 1997 aa16.58■□□□□ 0.25
RPAIN-217ENST00000575711 PRDM1O75626 825 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 GH2P01242 217 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 PTPRAP18433 802 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 RASA1P20936 1047 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 AKNAD1Q5T1N1 836 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 MFSD6Q6ZSS7 791 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 TBC1D10CQ8IV04 446 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 OTUD5Q96G74 571 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 WNK4Q96J92 1243 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 CAPNS2Q96L46 248 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 TOMM22Q9NS69 142 aa16.58■□□□□ 0.24
RPAIN-217ENST00000575711 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.58■□□□□ 0.24
RPAIN-217ENST00000575711 CYP21A2P08686 494 aa16.57■□□□□ 0.24
RPAIN-217ENST00000575711 AKR1B1P15121 316 aa16.57■□□□□ 0.24
RPAIN-217ENST00000575711 PPATQ06203 517 aa16.57■□□□□ 0.24
RPAIN-217ENST00000575711 TMEM179Q6ZVK1 233 aa16.57■□□□□ 0.24
RPAIN-217ENST00000575711 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
RPAIN-217ENST00000575711 NBPF3Q9H094 633 aa16.57■□□□□ 0.24
RPAIN-217ENST00000575711 USP17L5A8MUK1 530 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 FAM155AB1AL88 458 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-217ENST00000575711 EPB41L2O43491 1005 aaKnown RBP16.56■□□□□ 0.24
RPAIN-217ENST00000575711 ORC4O43929 436 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 FGRP09769 529 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-217ENST00000575711 JAG1P78504 1218 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 MKRN3Q13064 507 aaKnown RBP16.56■□□□□ 0.24
RPAIN-217ENST00000575711 PPIL2Q13356 520 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 RAB3GAP1Q15042 981 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 NECTIN1Q15223 517 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-217ENST00000575711 RRP12Q5JTH9 1297 aaKnown RBP16.56■□□□□ 0.24
RPAIN-217ENST00000575711 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 SPRYD7Q5W111 196 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-217ENST00000575711 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 DOCK1Q14185 1865 aa16.56■□□□□ 0.24
RPAIN-217ENST00000575711 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
RPAIN-217ENST00000575711 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
RPAIN-217ENST00000575711 TSPY3P0CV98 308 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 TSPY8P0CW00 308 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 VEGFBP49765 207 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 NT5C2P49902 561 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 NOGQ13253 232 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 CREB3L3Q68CJ9 461 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 TACC3Q9Y6A5 838 aa16.55■□□□□ 0.24
RPAIN-217ENST00000575711 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 NEDD4P46934 1319 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 IRF6O14896 467 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 SLC27A2O14975 620 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 GJA5P36382 358 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 TFAP4Q01664 338 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 TRDNQ13061 729 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 SEPT2Q15019 361 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 FAM47AQ5JRC9 791 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-217ENST00000575711 ESR2Q92731 530 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 KRT23Q9C075 422 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 AFG3L2Q9Y4W6 797 aa16.54■□□□□ 0.24
RPAIN-217ENST00000575711 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-217ENST00000575711 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 ICA1Q05084 483 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 ZNF280CQ8ND82 737 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 WDR18Q9BV38 432 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
RPAIN-217ENST00000575711 MANSC4A6NHS7 340 aaPredicted RBP16.52■□□□□ 0.24
RPAIN-217ENST00000575711 B4E1Z4 1266 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 E7EWF7 191 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 CXCL11O14625 94 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 MCCP23508 829 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 HSPA4P34932 840 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms