RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 PLCD1P51178 756 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 BACE1P56817 501 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 PRPF38BQ5VTL8 546 aaKnown RBP14.47□□□□□ -0.09
USP43-206ENST00000575346 ZSCAN25Q6NSZ9 544 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 LCORLQ8N3X6 602 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 GPATCH3Q96I76 525 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 ARHGAP39Q9C0H5 1083 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 BCL11AQ9H165 835 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 ATP8A2Q9NTI2 1148 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 PNMA3Q9UL41 463 aa14.47□□□□□ -0.09
USP43-206ENST00000575346 TTC41PQ6P2S7 1318 aa14.46□□□□□ -0.09
USP43-206ENST00000575346 GDF11O95390 407 aa14.46□□□□□ -0.09
USP43-206ENST00000575346 PSMC4P43686 418 aa14.46□□□□□ -0.09
USP43-206ENST00000575346 HMGCS2P54868 508 aa14.46□□□□□ -0.09
USP43-206ENST00000575346 PABPC4Q13310 644 aaKnown RBP eCLIP14.46□□□□□ -0.09
USP43-206ENST00000575346 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
USP43-206ENST00000575346 KBTBD3Q8NAB2 608 aa14.46□□□□□ -0.09
USP43-206ENST00000575346 RBBP6Q7Z6E9 1792 aaKnown RBP14.46□□□□□ -0.09
USP43-206ENST00000575346 USP17L10C9JJH3 530 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 MGAMO43451 1857 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 POLR3DP05423 398 aaPredicted RBP14.45□□□□□ -0.1
USP43-206ENST00000575346 HOXD10P28358 340 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 HOXA7P31268 230 aaPredicted RBP14.45□□□□□ -0.1
USP43-206ENST00000575346 SHMT1P34896 483 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 HDAC1Q13547 482 aaPredicted RBP14.45□□□□□ -0.1
USP43-206ENST00000575346 SHROOM1Q2M3G4 852 aaPredicted RBP14.45□□□□□ -0.1
USP43-206ENST00000575346 SLC4A8Q2Y0W8 1093 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 SLFNL1Q499Z3 407 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 SDR42E1Q8WUS8 393 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 TRIM47Q96LD4 638 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 ARMT1Q9H993 441 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 MCM9Q9NXL9 1143 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 SRRDQ9UH36 339 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 PTCH2Q9Y6C5 1203 aa14.45□□□□□ -0.1
USP43-206ENST00000575346 MBD4O95243 580 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 GH2P01242 217 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 CHGBP05060 677 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 GCLCP48506 637 aaPredicted RBP14.44□□□□□ -0.1
USP43-206ENST00000575346 MTMR2Q13614 643 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
USP43-206ENST00000575346 SMCR8Q8TEV9 937 aaPredicted RBP14.44□□□□□ -0.1
USP43-206ENST00000575346 GCC1Q96CN9 775 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 ZNF333Q96JL9 665 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 C12orf42Q96LP6 360 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 PDE4DIPQ5VU43 2346 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 HTTP42858 3142 aa14.44□□□□□ -0.1
USP43-206ENST00000575346 SALL3Q9BXA9 1300 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 PRKAB2O43741 272 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 OSBPP22059 807 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 FCGRTP55899 365 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 ABCB5Q2M3G0 1257 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 NBPF11Q86T75 865 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 PI4K2BQ8TCG2 481 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 PUS7LQ9H0K6 701 aaKnown RBP14.43□□□□□ -0.1
USP43-206ENST00000575346 ASCC2Q9H1I8 757 aaPredicted RBP14.43□□□□□ -0.1
USP43-206ENST00000575346 TMOD4Q9NZQ9 345 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 SWAP70Q9UH65 585 aa14.43□□□□□ -0.1
USP43-206ENST00000575346 ERC2O15083 957 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 GLRX3O76003 335 aaKnown RBP14.42□□□□□ -0.1
USP43-206ENST00000575346 FMNL1O95466 1100 aaPredicted RBP14.42□□□□□ -0.1
USP43-206ENST00000575346 ZFYP08048 801 aaPredicted RBP14.42□□□□□ -0.1
USP43-206ENST00000575346 GUCY1A2P33402 732 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 SLC9C1Q4G0N8 1177 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 C12orf60Q5U649 245 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 TSHZ3Q63HK5 1081 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 USP17L2Q6R6M4 530 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 APPBP2Q92624 585 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 CABP5Q9NP86 173 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 EMILIN3Q9NT22 766 aa14.42□□□□□ -0.1
USP43-206ENST00000575346 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
USP43-206ENST00000575346 BAZ2AQ9UIF9 1905 aaKnown RBP14.41□□□□□ -0.1
USP43-206ENST00000575346 RNF113AO15541 343 aaKnown RBP14.41□□□□□ -0.1
USP43-206ENST00000575346 EVX2Q03828 476 aa14.41□□□□□ -0.1
USP43-206ENST00000575346 ANKRD13CQ8N6S4 541 aa14.41□□□□□ -0.1
USP43-206ENST00000575346 STRBPQ96SI9 672 aaKnown RBP14.41□□□□□ -0.1
USP43-206ENST00000575346 KIAA1683Q9H0B3 1180 aa14.41□□□□□ -0.1
USP43-206ENST00000575346 MORF4L1Q9UBU8 362 aa14.41□□□□□ -0.1
USP43-206ENST00000575346 CYP2D6P10635 497 aa14.4□□□□□ -0.1
USP43-206ENST00000575346 MX1P20591 662 aa14.4□□□□□ -0.1
USP43-206ENST00000575346 USP14P54578 494 aa14.4□□□□□ -0.1
USP43-206ENST00000575346 LRRFIP1Q32MZ4 808 aaKnown RBP14.4□□□□□ -0.1
USP43-206ENST00000575346 GIMAP6Q6P9H5 292 aa14.4□□□□□ -0.1
USP43-206ENST00000575346 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
USP43-206ENST00000575346 OSBP2Q969R2 916 aa14.4□□□□□ -0.1
USP43-206ENST00000575346 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
USP43-206ENST00000575346 SLC4A4Q9Y6R1 1079 aa14.4□□□□□ -0.1
USP43-206ENST00000575346 POTEFA5A3E0 1075 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 USP17L12C9JPN9 530 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 USP17L21D6R901 530 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
USP43-206ENST00000575346 PRKCZQ05513 592 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 IRF5Q13568 498 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 RAB3GAP1Q15042 981 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 SBK1Q52WX2 424 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 ANKRD45Q5TZF3 282 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 CTR9Q6PD62 1173 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 C16orf86Q6ZW13 317 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 AMOTL1Q8IY63 956 aa14.39□□□□□ -0.11
USP43-206ENST00000575346 GTF3C2Q8WUA4 911 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms