RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 KCNJ6P48051 423 aa10.88□□□□□ -0.67
CCDC40-212ENST00000574799 TSGA10IPQ3SY00 556 aa10.88□□□□□ -0.67
CCDC40-212ENST00000574799 ZBTB38Q8NAP3 1195 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-212ENST00000574799 PIP4K2BP78356 416 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 TRIM29Q14134 588 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 AMIGO3Q86WK7 504 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 CEP57Q86XR8 500 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 ZNF34Q8IZ26 560 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 BCAS4Q8TDM0 211 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 NEUROD6Q96NK8 337 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 CDC23Q9UJX2 597 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 AKAP2Q9Y2D5 859 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 RIPOR2Q9Y4F9 1068 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 CDHR2Q9BYE9 1310 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 KCNQ2O43526 872 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 PNOCQ13519 176 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 FBXW10Q5XX13 1052 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 FCHSD1Q86WN1 690 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 TTLL11Q8NHH1 800 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 MED4Q9NPJ6 270 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 GPR108Q9NPR9 543 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 SUFUQ9UMX1 484 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 CLIC4Q9Y696 253 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 EYA2O00167 538 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 CCDC102BQ68D86 513 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 TTC19Q6DKK2 380 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-212ENST00000574799 LRRC31Q6UY01 552 aa10.87□□□□□ -0.67
CCDC40-212ENST00000574799 TRMT44Q8IYL2 757 aaKnown RBP10.87□□□□□ -0.67
CCDC40-212ENST00000574799 FMR1NBQ8N0W7 255 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-212ENST00000574799 GOLGA6CA6NDK9 693 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 STX10O60499 249 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 CUTAO60888 179 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 IPO7O95373 1038 aaKnown RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 GOLGA6DP0CG33 693 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 PFKFB1P16118 471 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 PPP2R5AQ15172 486 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 SPECC1LQ69YQ0 1117 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 VSTM4Q8IW00 320 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 CAPZA3Q96KX2 299 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 GREM2Q9H772 168 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 GOLGA6AQ9NYA3 693 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 ZEB2O60315 1214 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 LONRF3Q496Y0 759 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 CPLX2Q6PUV4 134 aaKnown RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 DDX46Q7L014 1031 aaKnown RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 RPAINQ86UA6 219 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 CTCFLQ8NI51 663 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 HINFPQ9BQA5 517 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 NFE2L3Q9Y4A8 694 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 AKR1B15C9JRZ8 316 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 VSNL1P62760 191 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 STIM1Q13586 685 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 RALYLQ86SE5 291 aaKnown RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 NSUN7Q8NE18 718 aaKnown RBP10.86□□□□□ -0.67
CCDC40-212ENST00000574799 DACH1Q9UI36 760 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 SAMM50Q9Y512 469 aa10.86□□□□□ -0.67
CCDC40-212ENST00000574799 CACNA1SQ13698 1873 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 NDUFAB1O14561 156 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 ADAMTS2O95450 1211 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 TRDNQ13061 729 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
CCDC40-212ENST00000574799 POTEDQ86YR6 584 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 SH3TC1Q8TE82 1336 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 LLPHQ9BRT6 129 aaKnown RBP10.85□□□□□ -0.67
CCDC40-212ENST00000574799 KCND1Q9NSA2 647 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 CYP21A2P08686 494 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 BEND6Q5SZJ8 279 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-212ENST00000574799 IQUBQ8NA54 791 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 NAPGQ99747 312 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-212ENST00000574799 FAM169AQ9Y6X4 670 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 BRWD3Q6RI45 1802 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 SOWAHDA6NJG2 315 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 GOLGA8BA8MQT2 603 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 ZMYND10O75800 440 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 MCM3P25205 808 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 PNKPQ96T60 521 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
CCDC40-212ENST00000574799 GUCA1BQ9UMX6 200 aa10.85□□□□□ -0.67
CCDC40-212ENST00000574799 M0R2C6 588 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 IKBKBO14920 756 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 MTF1Q14872 753 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 BARGINQ6ZT62 677 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 RSRC2Q7L4I2 434 aaKnown RBP10.84□□□□□ -0.67
CCDC40-212ENST00000574799 SLC35F6Q8N357 371 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 CCDC85AQ96PX6 553 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-212ENST00000574799 THRAP3Q9Y2W1 955 aaKnown RBP10.84□□□□□ -0.67
CCDC40-212ENST00000574799 CAMTA2O94983 1202 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 SSBP05455 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
CCDC40-212ENST00000574799 TUBBP07437 444 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 STX17P56962 302 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 HAND2P61296 217 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 ANO1Q5XXA6 986 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 KBTBD3Q8NAB2 608 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 CCDC196A0A1B0GTZ2 297 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 EXOC5O00471 708 aa10.84□□□□□ -0.67
CCDC40-212ENST00000574799 NEBLO76041 1014 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms