RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
VPS33B-208ENST00000574755 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
VPS33B-208ENST00000574755 TROAPQ12815 778 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 STX1AQ16623 288 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 AXDND1Q5T1B0 1012 aaPredicted RBP16.23■□□□□ 0.19
VPS33B-208ENST00000574755 MAP3K14Q99558 947 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 RBM28Q9NW13 759 aaKnown RBP16.23■□□□□ 0.19
VPS33B-208ENST00000574755 CMA1P23946 247 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 PTPAQ15257 358 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 MPNDQ8N594 471 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 FOXP1Q9H334 677 aaPredicted RBP16.22■□□□□ 0.19
VPS33B-208ENST00000574755 DDAH1O94760 285 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 LDHCP07864 332 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 IL1R1P14778 569 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 PFKFB1P16118 471 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 XBP1P17861 261 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 ERCC4Q92889 916 aaPredicted RBP16.22■□□□□ 0.19
VPS33B-208ENST00000574755 PODXL2Q9NZ53 605 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 NAV1Q8NEY1 1877 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 MROH7-TTC4A0A0A0MT08 1334 aa16.22■□□□□ 0.19
VPS33B-208ENST00000574755 C6orf229H3BNL8 230 aa16.21■□□□□ 0.19
VPS33B-208ENST00000574755 PLEKHA8P1O95397 391 aa16.21■□□□□ 0.19
VPS33B-208ENST00000574755 C12orf60Q5U649 245 aa16.21■□□□□ 0.19
VPS33B-208ENST00000574755 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
VPS33B-208ENST00000574755 POLLQ9UGP5 575 aa16.21■□□□□ 0.19
VPS33B-208ENST00000574755 MKRN1Q9UHC7 482 aaKnown RBP16.21■□□□□ 0.19
VPS33B-208ENST00000574755 ZNF202O95125 648 aa16.21■□□□□ 0.19
VPS33B-208ENST00000574755 CTCFLQ8NI51 663 aaPredicted RBP16.21■□□□□ 0.19
VPS33B-208ENST00000574755 TGFBRAP1Q8WUH2 860 aa16.21■□□□□ 0.19
VPS33B-208ENST00000574755 KLRG2A4D1S0 409 aaPredicted RBP16.2■□□□□ 0.18
VPS33B-208ENST00000574755 PPP4CP60510 307 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 NR5A1Q13285 461 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 C11orf57Q6ZUT1 292 aaPredicted RBP16.2■□□□□ 0.18
VPS33B-208ENST00000574755 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.2■□□□□ 0.18
VPS33B-208ENST00000574755 ANO10Q9NW15 660 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.2■□□□□ 0.18
VPS33B-208ENST00000574755 LRRC37AA6NMS7 1700 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 PPEF1O14829 653 aaPredicted RBP16.2■□□□□ 0.18
VPS33B-208ENST00000574755 RILPL1Q5EBL4 403 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 RTFDC1Q9BY42 306 aaPredicted RBP16.2■□□□□ 0.18
VPS33B-208ENST00000574755 VPS54Q9P1Q0 977 aa16.2■□□□□ 0.18
VPS33B-208ENST00000574755 V9GY48 417 aaPredicted RBP16.2■□□□□ 0.18
VPS33B-208ENST00000574755 ANKRD31Q8N7Z5 1873 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 PRPF3O43395 683 aaKnown RBP16.19■□□□□ 0.18
VPS33B-208ENST00000574755 ZNF500O60304 480 aaPredicted RBP16.19■□□□□ 0.18
VPS33B-208ENST00000574755 FUT2Q10981 343 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
VPS33B-208ENST00000574755 PKN1Q16512 942 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 MFSD14BQ5SR56 506 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 CDK5RAP2Q96SN8 1893 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 A0A087WWV3 80 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 BTDP43251 543 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 SYKP43405 635 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
VPS33B-208ENST00000574755 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
VPS33B-208ENST00000574755 TFAP4Q01664 338 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 SHC4Q6S5L8 630 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 TMC4Q7Z404 712 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 NLGN1Q8N2Q7 840 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 DYNLL2Q96FJ2 89 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 KIAA1468Q9P260 1216 aa16.19■□□□□ 0.18
VPS33B-208ENST00000574755 LTBP1Q14766 1721 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 APBA3O96018 575 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 CERS3Q8IU89 383 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 MAPKAPK5Q8IW41 473 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 CLIC6Q96NY7 704 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 ROBO3Q96MS0 1386 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 PLSCR1O15162 318 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 CUTAO60888 179 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 IQCB1Q15051 598 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
VPS33B-208ENST00000574755 SP8Q8IXZ3 490 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 SPC24Q8NBT2 197 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
VPS33B-208ENST00000574755 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
VPS33B-208ENST00000574755 BECN2A8MW95 431 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 NT5C2P49902 561 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 RCSD1Q6JBY9 416 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 CEP57L1Q8IYX8 460 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 KRI1Q8N9T8 703 aaKnown RBP16.17■□□□□ 0.18
VPS33B-208ENST00000574755 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 PHF20Q9BVI0 1012 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 TRIM5Q9C035 493 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 CABP5Q9NP86 173 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 SAP30BPQ9UHR5 308 aaKnown RBP16.17■□□□□ 0.18
VPS33B-208ENST00000574755 HPSEQ9Y251 543 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 CNTNAP5Q8WYK1 1306 aa16.17■□□□□ 0.18
VPS33B-208ENST00000574755 GOLGA6L6A8MZA4 724 aa16.16■□□□□ 0.18
VPS33B-208ENST00000574755 KRT2P35908 639 aa16.16■□□□□ 0.18
VPS33B-208ENST00000574755 RESP18Q5W5W9 173 aa16.16■□□□□ 0.18
VPS33B-208ENST00000574755 ZNF772Q68DY9 489 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms