RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
NDE1-210ENST00000574163 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
NDE1-210ENST00000574163 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
NDE1-210ENST00000574163 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
NDE1-210ENST00000574163 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
NDE1-210ENST00000574163 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
NDE1-210ENST00000574163 AFG3L2Q9Y4W6 797 aa11.74□□□□□ -0.53
NDE1-210ENST00000574163 SLC4A4Q9Y6R1 1079 aa11.74□□□□□ -0.53
NDE1-210ENST00000574163 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 SLURP2P0DP57 97 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 ANKRD23Q86SG2 305 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 PTPN18Q99952 460 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 WDR18Q9BV38 432 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
NDE1-210ENST00000574163 AS3MTQ9HBK9 375 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 ZBTB21Q9ULJ3 1066 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 ZHX2Q9Y6X8 837 aa11.73□□□□□ -0.53
NDE1-210ENST00000574163 LAMA4Q16363 1823 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 GSG1L2A8MUP6 293 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 M0R2C6 588 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 PRKAB2O43741 272 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 SHMT1P34896 483 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 PLCD1P51178 756 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 MOGSQ13724 837 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 RRP1BQ14684 758 aaKnown RBP11.72□□□□□ -0.53
NDE1-210ENST00000574163 SBK1Q52WX2 424 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 C12orf60Q5U649 245 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
NDE1-210ENST00000574163 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
NDE1-210ENST00000574163 ZNF280CQ8ND82 737 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 SLC45A1Q9Y2W3 748 aa11.72□□□□□ -0.53
NDE1-210ENST00000574163 BTBD19C9JJ37 291 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 GPR25O00155 361 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 NEFLP07196 543 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 CENPBP07199 599 aaPredicted RBP11.71□□□□□ -0.53
NDE1-210ENST00000574163 CRHR2Q13324 411 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
NDE1-210ENST00000574163 SLC4A8Q2Y0W8 1093 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 COL13A1Q5TAT6 717 aaPredicted RBP11.71□□□□□ -0.53
NDE1-210ENST00000574163 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 CENPQQ7L2Z9 268 aaPredicted RBP11.71□□□□□ -0.53
NDE1-210ENST00000574163 FAM43AQ8N2R8 423 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 NACAP1Q9BZK3 213 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 EPB41L4AQ9HCS5 686 aaPredicted RBP11.71□□□□□ -0.53
NDE1-210ENST00000574163 HELLSQ9NRZ9 838 aa11.71□□□□□ -0.53
NDE1-210ENST00000574163 ZMYM6O95789 1325 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 ADGRA2Q96PE1 1338 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 USP17L21D6R901 530 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 HIP1O00291 1037 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 GDF11O95390 407 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 TBC1D8O95759 1140 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 GH2P01242 217 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 CYP2D6P10635 497 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 PDE4AP27815 886 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 TDO2P48775 406 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 ABCB5Q2M3G0 1257 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 CERKLQ49MI3 558 aaPredicted RBP11.7□□□□□ -0.54
NDE1-210ENST00000574163 SH3D19Q5HYK7 790 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 CTR9Q6PD62 1173 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 CCDC17Q96LX7 622 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 PARK7Q99497 189 aaKnown RBP11.7□□□□□ -0.54
NDE1-210ENST00000574163 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
NDE1-210ENST00000574163 C19orf81C9J6K1 198 aa11.69□□□□□ -0.54
NDE1-210ENST00000574163 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
NDE1-210ENST00000574163 FKTNO75072 461 aa11.69□□□□□ -0.54
NDE1-210ENST00000574163 MFAP1P55081 439 aaKnown RBP11.69□□□□□ -0.54
NDE1-210ENST00000574163 SPP2Q13103 211 aa11.69□□□□□ -0.54
NDE1-210ENST00000574163 TTC22Q5TAA0 569 aa11.69□□□□□ -0.54
NDE1-210ENST00000574163 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
NDE1-210ENST00000574163 ZNF296Q8WUU4 475 aaPredicted RBP11.69□□□□□ -0.54
NDE1-210ENST00000574163 SEC62Q99442 399 aaKnown RBP11.69□□□□□ -0.54
NDE1-210ENST00000574163 CABP5Q9NP86 173 aa11.69□□□□□ -0.54
NDE1-210ENST00000574163 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.69□□□□□ -0.54
NDE1-210ENST00000574163 PLIN4Q96Q06 1357 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 CCDC171Q6TFL3 1326 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 PDHXO00330 501 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 TLR2O60603 784 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 BACE1P56817 501 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 JAG1P78504 1218 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 EVX2Q03828 476 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 PABPC4Q13310 644 aaKnown RBP eCLIP11.68□□□□□ -0.54
NDE1-210ENST00000574163 MTMR2Q13614 643 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 ALX1Q15699 326 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 MCMDC2Q4G0Z9 681 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 GPAT2Q6NUI2 795 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 GADL1Q6ZQY3 521 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
NDE1-210ENST00000574163 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 NAPBQ9H115 298 aa11.68□□□□□ -0.54
NDE1-210ENST00000574163 R3HDMLQ9H3Y0 253 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms