RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 TAOK2Q9UL54 1235 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 FOCADQ5VW36 1801 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 LOC285556D6RIA3 1793 aa25.71■■□□□ 1.71
CHRNB1-206ENST00000574054 ADCY3O60266 1144 aa25.7■■□□□ 1.7
CHRNB1-206ENST00000574054 GCLCP48506 637 aaPredicted RBP25.7■■□□□ 1.7
CHRNB1-206ENST00000574054 SH3D19Q5HYK7 790 aa25.7■■□□□ 1.7
CHRNB1-206ENST00000574054 COA7Q96BR5 231 aa25.7■■□□□ 1.7
CHRNB1-206ENST00000574054 RNF208Q9H0X6 261 aa25.7■■□□□ 1.7
CHRNB1-206ENST00000574054 ZBTB21Q9ULJ3 1066 aa25.7■■□□□ 1.7
CHRNB1-206ENST00000574054 IFIT2P09913 472 aaKnown RBP25.69■■□□□ 1.7
CHRNB1-206ENST00000574054 ELNP15502 786 aa25.69■■□□□ 1.7
CHRNB1-206ENST00000574054 BACE1P56817 501 aa25.69■■□□□ 1.7
CHRNB1-206ENST00000574054 IRX3P78415 501 aaPredicted RBP25.69■■□□□ 1.7
CHRNB1-206ENST00000574054 SIRT2Q8IXJ6 389 aa25.69■■□□□ 1.7
CHRNB1-206ENST00000574054 GINM1Q9NU53 330 aa25.69■■□□□ 1.7
CHRNB1-206ENST00000574054 TTF1Q15361 905 aaPredicted RBP25.68■■□□□ 1.7
CHRNB1-206ENST00000574054 TMED8Q6PL24 325 aaPredicted RBP25.68■■□□□ 1.7
CHRNB1-206ENST00000574054 NKX2-3Q8TAU0 364 aa25.68■■□□□ 1.7
CHRNB1-206ENST00000574054 SHISA4Q96DD7 197 aa25.68■■□□□ 1.7
CHRNB1-206ENST00000574054 DNAJC2Q99543 621 aaKnown RBP25.68■■□□□ 1.7
CHRNB1-206ENST00000574054 GCC1Q96CN9 775 aa25.67■■□□□ 1.7
CHRNB1-206ENST00000574054 CHMP4BQ9H444 224 aaKnown RBP25.67■■□□□ 1.7
CHRNB1-206ENST00000574054 CEP290O15078 2479 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 MAGEB6P1A0A0J9YX57 407 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 USP17L10C9JJH3 530 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 GOLIM4O00461 696 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 GH2P01242 217 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 GJB1P08034 283 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 SLC9C2Q5TAH2 1124 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 UNC93B1Q9H1C4 597 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 SERPINB13Q9UIV8 391 aa25.66■■□□□ 1.7
CHRNB1-206ENST00000574054 C19orf81C9J6K1 198 aa25.65■■□□□ 1.7
CHRNB1-206ENST00000574054 RAB11FIP3O75154 756 aa25.65■■□□□ 1.7
CHRNB1-206ENST00000574054 INHAP05111 366 aa25.65■■□□□ 1.7
CHRNB1-206ENST00000574054 PDE6AP16499 860 aa25.65■■□□□ 1.7
CHRNB1-206ENST00000574054 IRF5Q13568 498 aa25.65■■□□□ 1.7
CHRNB1-206ENST00000574054 MYH1P12882 1939 aa25.65■■□□□ 1.7
CHRNB1-206ENST00000574054 GJA8P48165 433 aa25.64■■□□□ 1.7
CHRNB1-206ENST00000574054 TTC6Q86TZ1 520 aa25.64■■□□□ 1.7
CHRNB1-206ENST00000574054 PXYLP1Q8TE99 480 aa25.64■■□□□ 1.7
CHRNB1-206ENST00000574054 RIOK1Q9BRS2 568 aaKnown RBP25.64■■□□□ 1.7
CHRNB1-206ENST00000574054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.63■■□□□ 1.69
CHRNB1-206ENST00000574054 P2RX7Q99572 595 aaKnown RBP25.63■■□□□ 1.69
CHRNB1-206ENST00000574054 FEZ1Q99689 392 aa25.63■■□□□ 1.69
CHRNB1-206ENST00000574054 EHD4Q9H223 541 aa25.63■■□□□ 1.69
CHRNB1-206ENST00000574054 HOXA7P31268 230 aaPredicted RBP25.62■■□□□ 1.69
CHRNB1-206ENST00000574054 EDC3Q96F86 508 aaKnown RBP25.62■■□□□ 1.69
CHRNB1-206ENST00000574054 CRNKL1Q9BZJ0 848 aaKnown RBP25.62■■□□□ 1.69
CHRNB1-206ENST00000574054 ZNF532Q9HCE3 1301 aa25.62■■□□□ 1.69
CHRNB1-206ENST00000574054 POLR3DP05423 398 aaPredicted RBP25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 HERVK_113P62684 666 aa25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 RAB3GAP1Q15042 981 aa25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 ZYXQ15942 572 aaKnown RBP25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 CERKLQ49MI3 558 aaPredicted RBP25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 C20orf194Q5TEA3 1177 aa25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 TATDN1Q6P1N9 297 aa25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 USP17L2Q6R6M4 530 aa25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 U2AF1L4Q8WU68 220 aaKnown RBP25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 MORF4L1Q9UBU8 362 aa25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 DOCK3Q8IZD9 2030 aa25.61■■□□□ 1.69
CHRNB1-206ENST00000574054 PEX10O60683 326 aa25.6■■□□□ 1.69
CHRNB1-206ENST00000574054 ABCB5Q2M3G0 1257 aa25.6■■□□□ 1.69
CHRNB1-206ENST00000574054 BOLA2Q9H3K6 86 aa25.6■■□□□ 1.69
CHRNB1-206ENST00000574054 EMILIN3Q9NT22 766 aa25.6■■□□□ 1.69
CHRNB1-206ENST00000574054 PLCD1P51178 756 aa25.59■■□□□ 1.69
CHRNB1-206ENST00000574054 DPF3Q92784 378 aa25.59■■□□□ 1.69
CHRNB1-206ENST00000574054 CABP5Q9NP86 173 aa25.59■■□□□ 1.69
CHRNB1-206ENST00000574054 PAG1Q9NWQ8 432 aa25.59■■□□□ 1.69
CHRNB1-206ENST00000574054 MCM9Q9NXL9 1143 aa25.59■■□□□ 1.69
CHRNB1-206ENST00000574054 HABP4Q5JVS0 413 aaKnown RBP25.58■■□□□ 1.69
CHRNB1-206ENST00000574054 GPRC5AQ8NFJ5 357 aa25.58■■□□□ 1.69
CHRNB1-206ENST00000574054 DEFB118Q96PH6 123 aa25.58■■□□□ 1.69
CHRNB1-206ENST00000574054 TXNRD2Q9NNW7 524 aa25.58■■□□□ 1.69
CHRNB1-206ENST00000574054 TCRBV5S4A2TA0A5A2 114 aa25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 H0YGN5 161 aa25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 FARP2O94887 1054 aaPredicted RBP25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 SGPL1O95470 568 aa25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 TFRCP02786 760 aaKnown RBP25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 SHMT1P34896 483 aa25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 PDE3AQ14432 1141 aa25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 LCORLQ8N3X6 602 aa25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 PAGR1Q9BTK6 254 aa25.57■■□□□ 1.68
CHRNB1-206ENST00000574054 NAV1Q8NEY1 1877 aa25.56■■□□□ 1.68
CHRNB1-206ENST00000574054 CCAR1Q8IX12 1150 aaKnown RBP25.56■■□□□ 1.68
CHRNB1-206ENST00000574054 GTF3C2Q8WUA4 911 aaPredicted RBP25.56■■□□□ 1.68
CHRNB1-206ENST00000574054 SDR42E1Q8WUS8 393 aa25.56■■□□□ 1.68
CHRNB1-206ENST00000574054 GJD2Q9UKL4 321 aa25.56■■□□□ 1.68
CHRNB1-206ENST00000574054 HMGCRP04035 888 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 ATP5JP18859 108 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 UBE2Q1Q7Z7E8 422 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 ACER1Q8TDN7 264 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 HTATIP2Q9BUP3 242 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 LRRCC1Q9C099 1032 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 ARMT1Q9H993 441 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 RBPJLQ9UBG7 517 aa25.55■■□□□ 1.68
CHRNB1-206ENST00000574054 DDX60LQ5H9U9 1706 aaKnown RBP25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 MPHOSPH10O00566 681 aaKnown RBP25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 USP14P54578 494 aa25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 ERVK-9P63128 1117 aa25.54■■□□□ 1.68
CHRNB1-206ENST00000574054 ERVK-24P63145 666 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 237.8 ms