RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ZBTB21Q9ULJ3 1066 aa33.4■■■□□ 2.94
SCARF1-207ENST00000573867 BAZ2AQ9UIF9 1905 aaKnown RBP33.4■■■□□ 2.94
SCARF1-207ENST00000573867 CYP2D7A0A087X1C5 515 aa33.39■■■□□ 2.94
SCARF1-207ENST00000573867 USP17L5A8MUK1 530 aa33.39■■■□□ 2.94
SCARF1-207ENST00000573867 PDHXO00330 501 aa33.39■■■□□ 2.94
SCARF1-207ENST00000573867 SPP2Q13103 211 aa33.39■■■□□ 2.94
SCARF1-207ENST00000573867 PLEKHM2Q8IWE5 1019 aa33.39■■■□□ 2.94
SCARF1-207ENST00000573867 ZFYVE28Q9HCC9 887 aa33.39■■■□□ 2.94
SCARF1-207ENST00000573867 ASNSP08243 561 aa33.38■■■□□ 2.93
SCARF1-207ENST00000573867 CAP1Q01518 475 aa33.38■■■□□ 2.93
SCARF1-207ENST00000573867 SLC44A5Q8NCS7 719 aa33.38■■■□□ 2.93
SCARF1-207ENST00000573867 ZNF280CQ8ND82 737 aa33.38■■■□□ 2.93
SCARF1-207ENST00000573867 GPAA1O43292 621 aa33.37■■■□□ 2.93
SCARF1-207ENST00000573867 GADL1Q6ZQY3 521 aa33.37■■■□□ 2.93
SCARF1-207ENST00000573867 DYNLL2Q96FJ2 89 aa33.37■■■□□ 2.93
SCARF1-207ENST00000573867 GSG1L2A8MUP6 293 aa33.36■■■□□ 2.93
SCARF1-207ENST00000573867 USP17L12C9JPN9 530 aa33.36■■■□□ 2.93
SCARF1-207ENST00000573867 USP17L21D6R901 530 aa33.36■■■□□ 2.93
SCARF1-207ENST00000573867 GH2P01242 217 aa33.36■■■□□ 2.93
SCARF1-207ENST00000573867 ZMYM1Q5SVZ6 1142 aa33.36■■■□□ 2.93
SCARF1-207ENST00000573867 CTU1Q7Z7A3 348 aaKnown RBP33.36■■■□□ 2.93
SCARF1-207ENST00000573867 WDR18Q9BV38 432 aa33.36■■■□□ 2.93
SCARF1-207ENST00000573867 ADGRA2Q96PE1 1338 aa33.35■■■□□ 2.93
SCARF1-207ENST00000573867 C12orf60Q5U649 245 aa33.35■■■□□ 2.93
SCARF1-207ENST00000573867 FASTKD5Q7L8L6 764 aaKnown RBP33.35■■■□□ 2.93
SCARF1-207ENST00000573867 EVI5LQ96CN4 794 aa33.35■■■□□ 2.93
SCARF1-207ENST00000573867 GINM1Q9NU53 330 aa33.35■■■□□ 2.93
SCARF1-207ENST00000573867 TLR2O60603 784 aa33.34■■■□□ 2.93
SCARF1-207ENST00000573867 CERKLQ49MI3 558 aaPredicted RBP33.34■■■□□ 2.93
SCARF1-207ENST00000573867 CTR9Q6PD62 1173 aa33.34■■■□□ 2.93
SCARF1-207ENST00000573867 TBC1D2Q9BYX2 928 aa33.34■■■□□ 2.93
SCARF1-207ENST00000573867 OSBPL3Q9H4L5 887 aa33.34■■■□□ 2.93
SCARF1-207ENST00000573867 EPB41L4AQ9HCS5 686 aaPredicted RBP33.34■■■□□ 2.93
SCARF1-207ENST00000573867 LOC285556D6RIA3 1793 aa33.34■■■□□ 2.93
SCARF1-207ENST00000573867 PDE4AP27815 886 aa33.33■■■□□ 2.93
SCARF1-207ENST00000573867 LRRFIP1Q32MZ4 808 aaKnown RBP33.33■■■□□ 2.93
SCARF1-207ENST00000573867 TREML2Q5T2D2 321 aa33.33■■■□□ 2.93
SCARF1-207ENST00000573867 CD99L2Q8TCZ2 262 aa33.33■■■□□ 2.93
SCARF1-207ENST00000573867 ABHD8Q96I13 439 aa33.33■■■□□ 2.93
SCARF1-207ENST00000573867 GUCY1A2P33402 732 aa33.32■■■□□ 2.92
SCARF1-207ENST00000573867 HMGCS2P54868 508 aa33.32■■■□□ 2.92
SCARF1-207ENST00000573867 SP3Q02447 781 aa33.32■■■□□ 2.92
SCARF1-207ENST00000573867 AS3MTQ9HBK9 375 aa33.32■■■□□ 2.92
SCARF1-207ENST00000573867 CYP2C8P10632 490 aa33.31■■■□□ 2.92
SCARF1-207ENST00000573867 MTMR2Q13614 643 aa33.31■■■□□ 2.92
SCARF1-207ENST00000573867 SH3D19Q5HYK7 790 aa33.31■■■□□ 2.92
SCARF1-207ENST00000573867 ABCB5Q2M3G0 1257 aa33.3■■■□□ 2.92
SCARF1-207ENST00000573867 C17orf99Q6UX52 265 aa33.3■■■□□ 2.92
SCARF1-207ENST00000573867 AGTPBP1Q9UPW5 1226 aa33.3■■■□□ 2.92
SCARF1-207ENST00000573867 CCDC129Q6ZRS4 1044 aa33.29■■■□□ 2.92
SCARF1-207ENST00000573867 PROCA1Q8NCQ7 364 aaPredicted RBP33.29■■■□□ 2.92
SCARF1-207ENST00000573867 CPA4Q9UI42 421 aa33.29■■■□□ 2.92
SCARF1-207ENST00000573867 HTTP42858 3142 aa33.28■■■□□ 2.92
SCARF1-207ENST00000573867 FOXP2O15409 715 aa33.28■■■□□ 2.92
SCARF1-207ENST00000573867 CAPN15O75808 1086 aa33.28■■■□□ 2.92
SCARF1-207ENST00000573867 BACE1P56817 501 aa33.28■■■□□ 2.92
SCARF1-207ENST00000573867 GIMAP6Q6P9H5 292 aa33.28■■■□□ 2.92
SCARF1-207ENST00000573867 DDRGK1Q96HY6 314 aa33.28■■■□□ 2.92
SCARF1-207ENST00000573867 SLC45A1Q9Y2W3 748 aa33.28■■■□□ 2.92
SCARF1-207ENST00000573867 SBK1Q52WX2 424 aa33.27■■■□□ 2.92
SCARF1-207ENST00000573867 C16orf86Q6ZW13 317 aa33.27■■■□□ 2.92
SCARF1-207ENST00000573867 ERO1AQ96HE7 468 aa33.27■■■□□ 2.92
SCARF1-207ENST00000573867 PARK7Q99497 189 aaKnown RBP33.27■■■□□ 2.92
SCARF1-207ENST00000573867 ARPP21Q9UBL0 812 aaPredicted RBP33.27■■■□□ 2.92
SCARF1-207ENST00000573867 SWAP70Q9UH65 585 aa33.27■■■□□ 2.92
SCARF1-207ENST00000573867 ZSWIM8A7E2V4 1837 aa33.27■■■□□ 2.92
SCARF1-207ENST00000573867 GNAT2P19087 354 aa33.26■■■□□ 2.91
SCARF1-207ENST00000573867 CDK8P49336 464 aa33.26■■■□□ 2.91
SCARF1-207ENST00000573867 SEPT2Q15019 361 aa33.26■■■□□ 2.91
SCARF1-207ENST00000573867 RAB3GAP1Q15042 981 aa33.26■■■□□ 2.91
SCARF1-207ENST00000573867 OTOP1Q7RTM1 612 aa33.26■■■□□ 2.91
SCARF1-207ENST00000573867 FAM227BQ96M60 508 aa33.26■■■□□ 2.91
SCARF1-207ENST00000573867 TRIM6-TRIM34B2RNG4 842 aa33.25■■■□□ 2.91
SCARF1-207ENST00000573867 PATL2C9JE40 543 aaKnown RBP33.25■■■□□ 2.91
SCARF1-207ENST00000573867 USP17L10C9JJH3 530 aa33.25■■■□□ 2.91
SCARF1-207ENST00000573867 ACER1Q8TDN7 264 aa33.25■■■□□ 2.91
SCARF1-207ENST00000573867 A0A0D9SFI3 127 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 AKR1B1P15121 316 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 AMOTL1Q8IY63 956 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 IFNL3Q8IZI9 196 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 RILPL2Q969X0 211 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 ARHGAP39Q9C0H5 1083 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 CABP5Q9NP86 173 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 TAOK2Q9UL54 1235 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 TRIM17Q9Y577 477 aa33.24■■■□□ 2.91
SCARF1-207ENST00000573867 BCRP11274 1271 aa33.23■■■□□ 2.91
SCARF1-207ENST00000573867 EMILIN3Q9NT22 766 aa33.23■■■□□ 2.91
SCARF1-207ENST00000573867 ROBO3Q96MS0 1386 aa33.22■■■□□ 2.91
SCARF1-207ENST00000573867 MPHOSPH10O00566 681 aaKnown RBP33.22■■■□□ 2.91
SCARF1-207ENST00000573867 APPP05067 770 aa33.22■■■□□ 2.91
SCARF1-207ENST00000573867 CTGFP29279 349 aa33.22■■■□□ 2.91
SCARF1-207ENST00000573867 MINDY4BA8MYZ0 360 aa33.21■■■□□ 2.91
SCARF1-207ENST00000573867 C19orf81C9J6K1 198 aa33.21■■■□□ 2.91
SCARF1-207ENST00000573867 TDO2P48775 406 aa33.21■■■□□ 2.91
SCARF1-207ENST00000573867 LACTBP83111 547 aaPredicted RBP33.21■■■□□ 2.91
SCARF1-207ENST00000573867 NMIQ13287 307 aaPredicted RBP33.21■■■□□ 2.91
SCARF1-207ENST00000573867 VPS53Q5VIR6 699 aa33.21■■■□□ 2.91
SCARF1-207ENST00000573867 CLEC10AQ8IUN9 316 aa33.21■■■□□ 2.91
SCARF1-207ENST00000573867 STK11IPQ8N1F8 1099 aa33.21■■■□□ 2.91
SCARF1-207ENST00000573867 ZYXQ15942 572 aaKnown RBP33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms