RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 STIM1Q13586 685 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 ME3Q16798 604 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 OTUD7BQ6GQQ9 843 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 NSMFQ6X4W1 530 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 FSIP1Q8NA03 581 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 HOMER2Q9NSB8 354 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 LMO7Q8WWI1 1683 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
SMG6-213ENST00000573166 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 FAM196BA6NMK8 535 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 LMNB1P20700 586 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 KIF4BQ2VIQ3 1234 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 RSBN1LQ6PCB5 846 aaPredicted RBP11.59□□□□□ -0.55
SMG6-213ENST00000573166 ZNF274Q96GC6 653 aaPredicted RBP11.59□□□□□ -0.55
SMG6-213ENST00000573166 ZNF512BQ96KM6 892 aaPredicted RBP11.59□□□□□ -0.55
SMG6-213ENST00000573166 ZSWIM5Q9P217 1185 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 DAGLAQ9Y4D2 1042 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 IVNS1ABPQ9Y6Y0 642 aa11.59□□□□□ -0.55
SMG6-213ENST00000573166 FRMPD2Q68DX3 1309 aaPredicted RBP11.58□□□□□ -0.56
SMG6-213ENST00000573166 JAK2O60674 1132 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 F13A1P00488 732 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 XRCC6P12956 609 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMG6-213ENST00000573166 GIMAP6Q6P9H5 292 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 ARMC9Q7Z3E5 817 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 RPAP1Q9BWH6 1393 aaPredicted RBP11.58□□□□□ -0.56
SMG6-213ENST00000573166 BMP15O95972 392 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 CAMK4Q16566 473 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 CCDC174Q6PII3 467 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 LRP10Q7Z4F1 713 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
SMG6-213ENST00000573166 RRAGDQ9NQL2 400 aaPredicted RBP11.58□□□□□ -0.56
SMG6-213ENST00000573166 TTLL1O95922 423 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 CHGBP05060 677 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 CCDC192P0DO97 292 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 PROM2Q8N271 834 aa11.58□□□□□ -0.56
SMG6-213ENST00000573166 MARCKSP29966 332 aaPredicted RBP11.57□□□□□ -0.56
SMG6-213ENST00000573166 EPS15P42566 896 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
SMG6-213ENST00000573166 CALML4Q96GE6 196 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 TPCN1Q9ULQ1 816 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 TMEM232C9JQI7 657 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 FLOT1O75955 427 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 IREB2P48200 963 aaKnown RBP11.57□□□□□ -0.56
SMG6-213ENST00000573166 DNM1Q05193 864 aaKnown RBP11.57□□□□□ -0.56
SMG6-213ENST00000573166 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 SLC44A5Q8NCS7 719 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 ZNF609O15014 1411 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 GSG1L2A8MUP6 293 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 DIS3L2Q8IYB7 885 aaKnown RBP11.57□□□□□ -0.56
SMG6-213ENST00000573166 BEGAINQ9BUH8 593 aa11.57□□□□□ -0.56
SMG6-213ENST00000573166 PHRF1Q9P1Y6 1649 aaKnown RBP11.56□□□□□ -0.56
SMG6-213ENST00000573166 SMC2O95347 1197 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 CFBP00751 764 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 FGFR2P21802 821 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 GTF3C6Q969F1 213 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 GH2P01242 217 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 LETM2Q2VYF4 491 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 CNNM3Q8NE01 707 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 ASNSP08243 561 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 MCM7P33993 719 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 RASSF7Q02833 373 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 APOA5Q6Q788 366 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 BRAPQ7Z569 592 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 APOBEC3FQ8IUX4 373 aaKnown RBP11.56□□□□□ -0.56
SMG6-213ENST00000573166 VPS54Q9P1Q0 977 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 ALS2Q96Q42 1657 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 STRCP1A6NGW2 1772 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 HSP90AA2PQ14568 343 aaPredicted RBP11.56□□□□□ -0.56
SMG6-213ENST00000573166 C9orf131Q5VYM1 1079 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 SCLT1Q96NL6 688 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 TSPY26PQ9H489 355 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 CNPY2Q9Y2B0 182 aa11.56□□□□□ -0.56
SMG6-213ENST00000573166 IDEP14735 1019 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 PDIA3P30101 505 aaKnown RBP11.55□□□□□ -0.56
SMG6-213ENST00000573166 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 GLT8D2Q9H1C3 349 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 KCNJ14Q9UNX9 436 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 PABPC4Q13310 644 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMG6-213ENST00000573166 KRT40Q6A162 431 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 HHIPL2Q6UWX4 724 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 CKAP2LQ8IYA6 745 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.562e-7■■■■□ 25.6
SMG6-213ENST00000573166 WRNIP1Q96S55 665 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 GRPEL1Q9HAV7 217 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 DDAH1O94760 285 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 RASA3Q14644 834 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 GPATCH4Q5T3I0 446 aaKnown RBP11.55□□□□□ -0.56
SMG6-213ENST00000573166 WWC2Q6AWC2 1192 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 CTR9Q6PD62 1173 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 PIK3AP1Q6ZUJ8 805 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 SAMD7Q7Z3H4 446 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms