RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 CELA3AP09093 270 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 ITGB5P18084 799 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 ATP2B1P20020 1258 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 LIG3P49916 1009 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 MAP3K11Q16584 847 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 IFI16Q16666 785 aaKnown RBP7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 LLGL2Q6P1M3 1020 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 UBE3DQ7Z6J8 389 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 ARMC5Q96C12 935 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 ASIC4Q96FT7 647 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 CACNA2D2Q9NY47 1150 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 PCDHA4Q9UN74 947 aa7.9□□□□□ -1.14
TOM1L1-215ENST00000572905 TRIM37O94972 964 aa7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 JUNBP17275 347 aaPredicted RBP7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 EIF4A3P38919 411 aaKnown RBP7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 OXCT1P55809 520 aa7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 RPS26P62854 115 aaKnown RBP7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 AOC3Q16853 763 aa7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 TTBK2Q6IQ55 1244 aa7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 OGFOD2Q6N063 350 aa7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 PHC3Q8NDX5 983 aa7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 RHOVQ96L33 236 aa7.89□□□□□ -1.15
TOM1L1-215ENST00000572905 SHROOM4Q9ULL8 1493 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 MINDY4BA8MYZ0 360 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 F6X3S4 739 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 NTF4P34130 210 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 PCNX4Q63HM2 1172 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 RASGRP4Q8TDF6 673 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 HRASLS5Q96KN8 279 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 ADAMTS1Q9UHI8 967 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 VAV3Q9UKW4 847 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 PLAGL2Q9UPG8 496 aa7.88□□□□□ -1.15
TOM1L1-215ENST00000572905 BTBD11A6QL63 1104 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 PAPLNO95428 1278 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 LMNB1P20700 586 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 PRKCQQ04759 706 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 LRRC14Q15048 493 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 AGMOQ6ZNB7 445 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 ELMO3Q96BJ8 720 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 HEXIM2Q96MH2 286 aaKnown RBP7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 MKNK2Q9HBH9 465 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 KCNQ5Q9NR82 932 aa7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 SUPT16HQ9Y5B9 1047 aaKnown RBP7.87□□□□□ -1.15
TOM1L1-215ENST00000572905 LOC105371045A0A1W2PR82 267 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 ATF4P18848 351 aaPredicted RBP7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 FUT4P22083 530 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 LMNB2Q03252 620 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 SNAP47Q5SQN1 464 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 ZBTB37Q5TC79 503 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 DIEXFQ68CQ4 756 aaKnown RBP7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 CDC37L1Q7L3B6 337 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 ZNF296Q8WUU4 475 aaPredicted RBP7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 RC3H2Q9HBD1 1191 aaKnown RBP7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 PRDM10Q9NQV6 1147 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 ADAMTS6Q9UKP5 1117 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 TLR6Q9Y2C9 796 aa7.86□□□□□ -1.15
TOM1L1-215ENST00000572905 TMEM265A0A087WTH1 108 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 PRAMEF27A3QJZ7 478 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 PF4P02776 101 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 RNASE1P07998 156 aaKnown RBP7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 FGRP09769 529 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 CAMK2GQ13555 558 aaPredicted RBP7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 PI4K2BQ8TCG2 481 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 SEC16BQ96JE7 1060 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 NT5C1AQ9BXI3 368 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
TOM1L1-215ENST00000572905 FANCGO15287 622 aa7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 FAM160A1Q05DH4 1040 aa7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 RING1Q06587 406 aa7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 COL9A2Q14055 689 aaPredicted RBP7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 INPP5AQ14642 412 aa7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 FBXL19Q6PCT2 694 aa7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 CCDC84Q86UT8 332 aaPredicted RBP7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 MBNL3Q9NUK0 354 aaKnown RBP7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 CYP8B1Q9UNU6 501 aa7.84□□□□□ -1.15
TOM1L1-215ENST00000572905 BIN1O00499 593 aa7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 TFE3P19532 575 aaPredicted RBP7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 PTPN11Q06124 597 aaPredicted RBP7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 ANGEL2Q5VTE6 544 aaKnown RBP7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 LRFN4Q6PJG9 635 aa7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 ARMCX6Q7L4S7 300 aa7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 MCF2L2Q86YR7 1114 aa7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 GOLM1Q8NBJ4 401 aa7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 DHX38Q92620 1227 aaKnown RBP7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 MIR1-1HGQ9H1L0 117 aa7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 PRDM7Q9NQW5 492 aa7.83□□□□□ -1.16
TOM1L1-215ENST00000572905 GREM1O60565 184 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 GARTP22102 1010 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 APOBRQ0VD83 1088 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 FAM214BQ7L5A3 538 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 PLPPR2Q96GM1 343 aa7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 EAF1Q96JC9 268 aaPredicted RBP7.82□□□□□ -1.16
TOM1L1-215ENST00000572905 DNAJC2Q99543 621 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms