RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 MAGEB6Q8N7X4 407 aa20.77■□□□□ 0.92
ATP2A3-212ENST00000572694 SHISA4Q96DD7 197 aa20.77■□□□□ 0.92
ATP2A3-212ENST00000572694 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.92
ATP2A3-212ENST00000572694 ASCC2Q9H1I8 757 aaPredicted RBP20.77■□□□□ 0.92
ATP2A3-212ENST00000572694 ANTXR1Q9H6X2 564 aa20.77■□□□□ 0.92
ATP2A3-212ENST00000572694 ZBTB40Q9NUA8 1239 aa20.77■□□□□ 0.92
ATP2A3-212ENST00000572694 USP17L10C9JJH3 530 aa20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 TTF1Q15361 905 aaPredicted RBP20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 TATDN1Q6P1N9 297 aa20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 UBE2Q1Q7Z7E8 422 aa20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 KIF1BPQ96EK5 621 aa20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 CHMP4BQ9H444 224 aaKnown RBP20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 TMOD4Q9NZQ9 345 aa20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 MORF4L1Q9UBU8 362 aa20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 MYH1P12882 1939 aa20.76■□□□□ 0.91
ATP2A3-212ENST00000572694 HMMRO75330 724 aa20.75■□□□□ 0.91
ATP2A3-212ENST00000572694 CLASRPQ8N2M8 674 aaKnown RBP20.75■□□□□ 0.91
ATP2A3-212ENST00000572694 EHD4Q9H223 541 aa20.75■□□□□ 0.91
ATP2A3-212ENST00000572694 SAP30BPQ9UHR5 308 aaKnown RBP20.75■□□□□ 0.91
ATP2A3-212ENST00000572694 NDUFB9Q9Y6M9 179 aa20.75■□□□□ 0.91
ATP2A3-212ENST00000572694 SGPL1O95470 568 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 USP5P45974 858 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 MTMR2Q13614 643 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 HABP4Q5JVS0 413 aaKnown RBP20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 TTC6Q86TZ1 520 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 SIRT2Q8IXJ6 389 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 MIGA1Q8NAN2 632 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 IL1RAPL2Q9NP60 686 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 GJD2Q9UKL4 321 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 ZBTB21Q9ULJ3 1066 aa20.74■□□□□ 0.91
ATP2A3-212ENST00000572694 RAB11FIP3O75154 756 aa20.73■□□□□ 0.91
ATP2A3-212ENST00000572694 U2AF1L4Q8WU68 220 aaKnown RBP20.73■□□□□ 0.91
ATP2A3-212ENST00000572694 P2RX7Q99572 595 aaKnown RBP20.73■□□□□ 0.91
ATP2A3-212ENST00000572694 RIOK1Q9BRS2 568 aaKnown RBP20.73■□□□□ 0.91
ATP2A3-212ENST00000572694 UNC93B1Q9H1C4 597 aa20.73■□□□□ 0.91
ATP2A3-212ENST00000572694 SERPINB13Q9UIV8 391 aa20.73■□□□□ 0.91
ATP2A3-212ENST00000572694 GDF11O95390 407 aa20.72■□□□□ 0.91
ATP2A3-212ENST00000572694 ELNP15502 786 aa20.72■□□□□ 0.91
ATP2A3-212ENST00000572694 IRX3P78415 501 aaPredicted RBP20.72■□□□□ 0.91
ATP2A3-212ENST00000572694 COG6Q9Y2V7 657 aa20.72■□□□□ 0.91
ATP2A3-212ENST00000572694 INHAP05111 366 aa20.71■□□□□ 0.91
ATP2A3-212ENST00000572694 PAK6Q9NQU5 681 aaPredicted RBP20.71■□□□□ 0.91
ATP2A3-212ENST00000572694 EMILIN3Q9NT22 766 aa20.71■□□□□ 0.91
ATP2A3-212ENST00000572694 IFIT2P09913 472 aaKnown RBP20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 HERVK_113P62684 666 aa20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 SHROOM1Q2M3G4 852 aaPredicted RBP20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 SLC9C2Q5TAH2 1124 aa20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L2Q6R6M4 530 aa20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 GPRC5AQ8NFJ5 357 aa20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 GTF3C2Q8WUA4 911 aaPredicted RBP20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 C12orf42Q96LP6 360 aa20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 HTATIP2Q9BUP3 242 aa20.7■□□□□ 0.9
ATP2A3-212ENST00000572694 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
ATP2A3-212ENST00000572694 GH2P01242 217 aa20.69■□□□□ 0.9
ATP2A3-212ENST00000572694 CERKLQ49MI3 558 aaPredicted RBP20.69■□□□□ 0.9
ATP2A3-212ENST00000572694 RBPJLQ9UBG7 517 aa20.69■□□□□ 0.9
ATP2A3-212ENST00000572694 RCAN3Q9UKA8 241 aa20.69■□□□□ 0.9
ATP2A3-212ENST00000572694 H0YGN5 161 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 PDE6AP16499 860 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 PLCD1P51178 756 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 DPF3Q92784 378 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 CRISPLD2Q9H0B8 497 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 TXNRD2Q9NNW7 524 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 TAOK2Q9UL54 1235 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 CEP290O15078 2479 aa20.68■□□□□ 0.9
ATP2A3-212ENST00000572694 TCRBV5S4A2TA0A5A2 114 aa20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 TFRCP02786 760 aaKnown RBP20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 XRCC5P13010 732 aaKnown RBP20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 USP14P54578 494 aa20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 GABPAQ06546 454 aa20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 PDE3AQ14432 1141 aa20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 CRNKL1Q9BZJ0 848 aaKnown RBP20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 CABP5Q9NP86 173 aa20.67■□□□□ 0.9
ATP2A3-212ENST00000572694 GOLIM4O00461 696 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 FARP2O94887 1054 aaPredicted RBP20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 HMGCRP04035 888 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 ATP5JP18859 108 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 SHMT1P34896 483 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 ABCB5Q2M3G0 1257 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 Q3C1V9 767 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 DEFB118Q96PH6 123 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 COLQQ9Y215 455 aaPredicted RBP20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 ZNF532Q9HCE3 1301 aa20.66■□□□□ 0.9
ATP2A3-212ENST00000572694 PLXNB2O15031 1838 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 RPTORQ8N122 1335 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L15C9J2P7 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L13C9JLJ4 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L11C9JVI0 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L18D6R9N7 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L22D6RA61 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L17D6RBQ6 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L19D6RCP7 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 USP17L20D6RJB6 530 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 APBB1O00213 710 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 POLR3DP05423 398 aaPredicted RBP20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 MAPK4P31152 587 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 ERVK-9P63128 1117 aa20.65■□□□□ 0.9
ATP2A3-212ENST00000572694 ERVK-24P63145 666 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms