RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PICK1Q9NRD5 415 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 PALD1Q9ULE6 856 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 ATRNL1Q5VV63 1379 aa9.37□□□□□ -0.91
SMG6-211ENST00000572369 COL2A1P02458 1487 aaPredicted RBP9.36□□□□□ -0.91
SMG6-211ENST00000572369 FAM196BA6NMK8 535 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 TRIM6-TRIM34B2RNG4 842 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 RNF113AO15541 343 aaKnown RBP9.36□□□□□ -0.91
SMG6-211ENST00000572369 MBD4O95243 580 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 POLR3DP05423 398 aaPredicted RBP9.36□□□□□ -0.91
SMG6-211ENST00000572369 ZFYP08048 801 aaPredicted RBP9.36□□□□□ -0.91
SMG6-211ENST00000572369 PDE1AP54750 535 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 INHBEP58166 350 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 UBE3CQ15386 1083 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 LCORLQ8N3X6 602 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 CNKSR2Q8WXI2 1034 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 P2RX7Q99572 595 aaKnown RBP9.36□□□□□ -0.91
SMG6-211ENST00000572369 PI4KBQ9UBF8 816 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 HERC5Q9UII4 1024 aaKnown RBP9.36□□□□□ -0.91
SMG6-211ENST00000572369 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 SNCAIPQ9Y6H5 919 aa9.36□□□□□ -0.91
SMG6-211ENST00000572369 MYH8P13535 1937 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 BAZ2AQ9UIF9 1905 aaKnown RBP9.35□□□□□ -0.91
SMG6-211ENST00000572369 TCRBV5S4A2TA0A5A2 114 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 BDP1A6H8Y1 2624 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 CTNND1O60716 968 aaKnown RBP9.35□□□□□ -0.91
SMG6-211ENST00000572369 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 GTF2A2P52657 109 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 NUCB1Q02818 461 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
SMG6-211ENST00000572369 SDR42E1Q8WUS8 393 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 RILPL2Q969X0 211 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 RIOK1Q9BRS2 568 aaKnown RBP9.35□□□□□ -0.91
SMG6-211ENST00000572369 MCM9Q9NXL9 1143 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 ZNF112Q9UJU3 913 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 SLC4A4Q9Y6R1 1079 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 LAMB1P07942 1786 aa9.35□□□□□ -0.91
SMG6-211ENST00000572369 SIPA1L1O43166 1804 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 CCL15-CCL14A0A0B4J2E2 113 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 TBC1D12O60347 775 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 EVI5O60447 810 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 CHGBP05060 677 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 APPP05067 770 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 CETPP11597 493 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 GJA5P36382 358 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 CAP1Q01518 475 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 PPATQ06203 517 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 SNAPC2Q13487 334 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 CCL15Q16663 113 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 FAM109BQ6ICB4 259 aaPredicted RBP9.34□□□□□ -0.91
SMG6-211ENST00000572369 SCYL3Q8IZE3 742 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 TDHQ8IZJ6 230 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 APPBP2Q92624 585 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 EVI5LQ96CN4 794 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 PUS7LQ9H0K6 701 aaKnown RBP9.34□□□□□ -0.91
SMG6-211ENST00000572369 ATP8A2Q9NTI2 1148 aa9.34□□□□□ -0.91
SMG6-211ENST00000572369 SALL3Q9BXA9 1300 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 PHF20L1A8MW92 1017 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 PRKAB2O43741 272 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 MAP3K10Q02779 954 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 PPIL2Q13356 520 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 NOL9Q5SY16 702 aaKnown RBP9.33□□□□□ -0.92
SMG6-211ENST00000572369 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 SH3TC2Q8TF17 1288 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 DCP1AQ9NPI6 582 aaPredicted RBP9.33□□□□□ -0.92
SMG6-211ENST00000572369 SERPINB13Q9UIV8 391 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 ZHX2Q9Y6X8 837 aa9.33□□□□□ -0.92
SMG6-211ENST00000572369 DDX60LQ5H9U9 1706 aaKnown RBP9.32□□□□□ -0.92
SMG6-211ENST00000572369 MPHOSPH10O00566 681 aaKnown RBP9.32□□□□□ -0.92
SMG6-211ENST00000572369 IRF6O14896 467 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 GDF11O95390 407 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 PTPRAP18433 802 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 GNAT2P19087 354 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 CAP2P40123 477 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 TDO2P48775 406 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 NKX2-3Q8TAU0 364 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 OSBP2Q969R2 916 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 AS3MTQ9HBK9 375 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 CABP5Q9NP86 173 aa9.32□□□□□ -0.92
SMG6-211ENST00000572369 PHIPQ8WWQ0 1821 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 TRIM75PA6NK02 468 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 M0R2C6 588 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 IGF2BP3O00425 579 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMG6-211ENST00000572369 GPAA1O43292 621 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 ASNSP08243 561 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 PLCD1P51178 756 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 SP3Q02447 781 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 TAF1CQ15572 869 aaPredicted RBP9.31□□□□□ -0.92
SMG6-211ENST00000572369 CERKLQ49MI3 558 aaPredicted RBP9.31□□□□□ -0.92
SMG6-211ENST00000572369 GADL1Q6ZQY3 521 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms