RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 SAMM50Q9Y512 469 aa4.57□□□□□ -1.68
RPA1-204ENST00000571725 TMEM238LA0A1B0GVL6 79 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 OVOL3O00110 214 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 ITIH2P19823 946 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 GLDCP23378 1020 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 HNRNPUQ00839 825 aaKnown RBP eCLIP4.56□□□□□ -1.68
RPA1-204ENST00000571725 CDK5R2Q13319 367 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 SKOR2Q2VWA4 1001 aaPredicted RBP4.56□□□□□ -1.68
RPA1-204ENST00000571725 NAALADL2Q58DX5 795 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 RPS26P11Q5JNZ5 115 aaPredicted RBP4.56□□□□□ -1.68
RPA1-204ENST00000571725 SEZ6L2Q6UXD5 910 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 CXorf38Q8TB03 319 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 ANKRD24Q8TF21 1146 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 ASB11Q8WXH4 323 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 SOX17Q9H6I2 414 aaPredicted RBP4.56□□□□□ -1.68
RPA1-204ENST00000571725 MKNK2Q9HBH9 465 aa4.56□□□□□ -1.68
RPA1-204ENST00000571725 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.56□□□□□ -1.68
RPA1-204ENST00000571725 TRPA1O75762 1119 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 ACPPP15309 386 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 LMNB1P20700 586 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 FCGRTP55899 365 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 KRTAP10-2P60368 255 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 NFKB2Q00653 900 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 PPP2R3AQ06190 1150 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 CCDC85BQ15834 202 aaPredicted RBP4.55□□□□□ -1.68
RPA1-204ENST00000571725 C9orf131Q5VYM1 1079 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 PI16Q6UXB8 463 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 SV2BQ7L1I2 683 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 USP48Q86UV5 1035 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 METTL16Q86W50 562 aaKnown RBP4.55□□□□□ -1.68
RPA1-204ENST00000571725 RELL1Q8IUW5 271 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 CCNJLQ8IV13 435 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 TMEM102Q8N9M5 508 aaPredicted RBP4.55□□□□□ -1.68
RPA1-204ENST00000571725 KCNK12Q9HB15 430 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 DZANK1Q9NVP4 752 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 RTEL1Q9NZ71 1219 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 AKAP2Q9Y2D5 859 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 INPP5FQ9Y2H2 1132 aa4.55□□□□□ -1.68
RPA1-204ENST00000571725 ZCCHC6Q5VYS8 1495 aaKnown RBP4.55□□□□□ -1.68
RPA1-204ENST00000571725 CTSHP09668 335 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 LDLRAD1Q5T700 205 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 SLC43A3Q8NBI5 491 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 ASAP3Q8TDY4 903 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 UBXN4Q92575 508 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 SLC26A8Q96RN1 970 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 ZKSCAN3Q9BRR0 538 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 BHLHE41Q9C0J9 482 aaPredicted RBP4.54□□□□□ -1.68
RPA1-204ENST00000571725 CAPN10Q9HC96 672 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 RNF19AQ9NV58 838 aa4.54□□□□□ -1.68
RPA1-204ENST00000571725 DDX41Q9UJV9 622 aaKnown RBP4.54□□□□□ -1.68
RPA1-204ENST00000571725 MYO15BQ96JP2 1530 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 DCAF1Q9Y4B6 1507 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 SASH1O94885 1247 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 INSRRP14616 1297 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 PUM1Q14671 1186 aaKnown RBP eCLIP4.53□□□□□ -1.68
RPA1-204ENST00000571725 PEAR1Q5VY43 1037 aaPredicted RBP4.53□□□□□ -1.68
RPA1-204ENST00000571725 HHIPQ96QV1 700 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 RSRP1Q9BUV0 290 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 PIDD1Q9HB75 910 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 SNX11Q9Y5W9 270 aa4.53□□□□□ -1.68
RPA1-204ENST00000571725 SHROOM4Q9ULL8 1493 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 A0A096LPE4 126 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 A0A1W2PPZ6 126 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 NFKBIEO00221 500 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 ESRRAP11474 423 aaPredicted RBP4.52□□□□□ -1.69
RPA1-204ENST00000571725 ATP2B1P20020 1258 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 MAOBP27338 520 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 OXCT1P55809 520 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 ARID5AQ03989 594 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 SOGA3Q5TF21 947 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 MEI1Q5TIA1 1274 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 TCERG1LQ5VWI1 586 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 VN1R5Q7Z5H4 357 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 NXPE3Q969Y0 559 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 ARMC5Q96C12 935 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 KCNC2Q96PR1 638 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 TCF12Q99081 682 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 TANGO6Q9C0B7 1094 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 ABCB6Q9NP58 842 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 LATS2Q9NRM7 1088 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 TMEM39AQ9NV64 488 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 PPP1R1BQ9UD71 204 aaPredicted RBP4.52□□□□□ -1.69
RPA1-204ENST00000571725 NACADO15069 1562 aa4.52□□□□□ -1.69
RPA1-204ENST00000571725 CYP11A1P05108 521 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 ITPKAP23677 461 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 GBP2P32456 591 aaPredicted RBP4.51□□□□□ -1.69
RPA1-204ENST00000571725 RAD51AP2Q09MP3 1159 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 POU4F3Q15319 338 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 SCARA3Q6AZY7 606 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 ERMP1Q7Z2K6 904 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 KIAA0825Q8IV33 1275 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 C3orf58Q8NDZ4 430 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 TMEM74Q96NL1 305 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 CLEC4MQ9H2X3 399 aaPredicted RBP4.51□□□□□ -1.69
RPA1-204ENST00000571725 PLAGL2Q9UPG8 496 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 RB1CC1Q8TDY2 1594 aa4.51□□□□□ -1.69
RPA1-204ENST00000571725 RPS26P62854 115 aaKnown RBP4.5□□□□□ -1.69
RPA1-204ENST00000571725 LRRC14Q15048 493 aa4.5□□□□□ -1.69
RPA1-204ENST00000571725 ZNF394Q53GI3 561 aa4.5□□□□□ -1.69
RPA1-204ENST00000571725 TPTE2Q6XPS3 522 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms