RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 STRBPQ96SI9 672 aaKnown RBP21.73■■□□□ 1.07
LITAF-204ENST00000570798 TRIM75PA6NK02 468 aa21.72■■□□□ 1.07
LITAF-204ENST00000570798 GDF11O95390 407 aa21.72■■□□□ 1.07
LITAF-204ENST00000570798 NUCB1Q02818 461 aa21.72■■□□□ 1.07
LITAF-204ENST00000570798 SPP2Q13103 211 aa21.72■■□□□ 1.07
LITAF-204ENST00000570798 SHROOM1Q2M3G4 852 aaPredicted RBP21.72■■□□□ 1.07
LITAF-204ENST00000570798 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
LITAF-204ENST00000570798 WDR18Q9BV38 432 aa21.72■■□□□ 1.07
LITAF-204ENST00000570798 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
LITAF-204ENST00000570798 SHMT1P34896 483 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 SP3Q02447 781 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 LRRFIP1Q32MZ4 808 aaKnown RBP21.71■■□□□ 1.07
LITAF-204ENST00000570798 CHD1LQ86WJ1 897 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 AS3MTQ9HBK9 375 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 TAOK2Q9UL54 1235 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 SLC45A1Q9Y2W3 748 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 SLC4A4Q9Y6R1 1079 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 ADGRA2Q96PE1 1338 aa21.71■■□□□ 1.07
LITAF-204ENST00000570798 CYP2D6P10635 497 aa21.7■■□□□ 1.06
LITAF-204ENST00000570798 SH3D19Q5HYK7 790 aa21.7■■□□□ 1.06
LITAF-204ENST00000570798 GADL1Q6ZQY3 521 aa21.7■■□□□ 1.06
LITAF-204ENST00000570798 ERO1AQ96HE7 468 aa21.7■■□□□ 1.06
LITAF-204ENST00000570798 CAP1Q01518 475 aa21.69■■□□□ 1.06
LITAF-204ENST00000570798 PKN2Q16513 984 aaKnown RBP21.69■■□□□ 1.06
LITAF-204ENST00000570798 CERKLQ49MI3 558 aaPredicted RBP21.69■■□□□ 1.06
LITAF-204ENST00000570798 C12orf60Q5U649 245 aa21.69■■□□□ 1.06
LITAF-204ENST00000570798 C17orf99Q6UX52 265 aa21.69■■□□□ 1.06
LITAF-204ENST00000570798 PROCA1Q8NCQ7 364 aaPredicted RBP21.69■■□□□ 1.06
LITAF-204ENST00000570798 FSD1Q9BTV5 496 aa21.69■■□□□ 1.06
LITAF-204ENST00000570798 ZSWIM8A7E2V4 1837 aa21.69■■□□□ 1.06
LITAF-204ENST00000570798 GSG1L2A8MUP6 293 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 USP17L12C9JPN9 530 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 USP17L21D6R901 530 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 M0R2C6 588 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 GH2P01242 217 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 ZMYM1Q5SVZ6 1142 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 PLEKHM2Q8IWE5 1019 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 CD99L2Q8TCZ2 262 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 EVI5LQ96CN4 794 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 OSBPL3Q9H4L5 887 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 AGTPBP1Q9UPW5 1226 aa21.68■■□□□ 1.06
LITAF-204ENST00000570798 SMIM22K7EJ46 135 aa21.67■■□□□ 1.06
LITAF-204ENST00000570798 GPAA1O43292 621 aa21.67■■□□□ 1.06
LITAF-204ENST00000570798 GIMAP6Q6P9H5 292 aa21.67■■□□□ 1.06
LITAF-204ENST00000570798 CTR9Q6PD62 1173 aa21.67■■□□□ 1.06
LITAF-204ENST00000570798 OTOP1Q7RTM1 612 aa21.67■■□□□ 1.06
LITAF-204ENST00000570798 PARK7Q99497 189 aaKnown RBP21.67■■□□□ 1.06
LITAF-204ENST00000570798 SWAP70Q9UH65 585 aa21.67■■□□□ 1.06
LITAF-204ENST00000570798 MGAMO43451 1857 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 CYP2D7A0A087X1C5 515 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 C19orf81C9J6K1 198 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 CYP2C8P10632 490 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 HMGCS2P54868 508 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 BACE1P56817 501 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 ABCB5Q2M3G0 1257 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 TREML2Q5T2D2 321 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 DYNLL2Q96FJ2 89 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
LITAF-204ENST00000570798 SEC62Q99442 399 aaKnown RBP21.66■■□□□ 1.06
LITAF-204ENST00000570798 GNAT2P19087 354 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 GUCY1A2P33402 732 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 MTMR2Q13614 643 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 SBK1Q52WX2 424 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 TICAM2Q86XR7 235 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 SLC44A5Q8NCS7 719 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 CPA4Q9UI42 421 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 TRIM17Q9Y577 477 aa21.65■■□□□ 1.06
LITAF-204ENST00000570798 USP17L10C9JJH3 530 aa21.64■■□□□ 1.05
LITAF-204ENST00000570798 CAPN15O75808 1086 aa21.64■■□□□ 1.05
LITAF-204ENST00000570798 BCRP11274 1271 aa21.64■■□□□ 1.05
LITAF-204ENST00000570798 FBXO46Q6PJ61 603 aaPredicted RBP21.64■■□□□ 1.05
LITAF-204ENST00000570798 AMOTL1Q8IY63 956 aa21.64■■□□□ 1.05
LITAF-204ENST00000570798 EPB41L4AQ9HCS5 686 aaPredicted RBP21.64■■□□□ 1.05
LITAF-204ENST00000570798 CABP5Q9NP86 173 aa21.64■■□□□ 1.05
LITAF-204ENST00000570798 ARPP21Q9UBL0 812 aaPredicted RBP21.64■■□□□ 1.05
LITAF-204ENST00000570798 PATL2C9JE40 543 aaKnown RBP21.63■■□□□ 1.05
LITAF-204ENST00000570798 C16orf86Q6ZW13 317 aa21.63■■□□□ 1.05
LITAF-204ENST00000570798 EFCC1Q9HA90 598 aa21.63■■□□□ 1.05
LITAF-204ENST00000570798 CDK8P49336 464 aa21.62■■□□□ 1.05
LITAF-204ENST00000570798 LACTBP83111 547 aaPredicted RBP21.62■■□□□ 1.05
LITAF-204ENST00000570798 RAB3GAP1Q15042 981 aa21.62■■□□□ 1.05
LITAF-204ENST00000570798 EMILIN3Q9NT22 766 aa21.62■■□□□ 1.05
LITAF-204ENST00000570798 GREB1LQ9C091 1923 aaPredicted RBP21.61■■□□□ 1.05
LITAF-204ENST00000570798 HOXA7P31268 230 aaPredicted RBP21.61■■□□□ 1.05
LITAF-204ENST00000570798 PABPC4Q13310 644 aaKnown RBP eCLIP21.61■■□□□ 1.05
LITAF-204ENST00000570798 SEPT2Q15019 361 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 IFNL3Q8IZI9 196 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 C12orf42Q96LP6 360 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 ARHGAP39Q9C0H5 1083 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 TMOD4Q9NZQ9 345 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 PNMA3Q9UL41 463 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 HPS5Q9UPZ3 1129 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 PTPN22Q9Y2R2 807 aa21.61■■□□□ 1.05
LITAF-204ENST00000570798 CTGFP29279 349 aa21.6■■□□□ 1.05
LITAF-204ENST00000570798 ARHGEF6Q15052 776 aa21.6■■□□□ 1.05
LITAF-204ENST00000570798 USP17L2Q6R6M4 530 aa21.6■■□□□ 1.05
LITAF-204ENST00000570798 TMEM179Q6ZVK1 233 aa21.6■■□□□ 1.05
LITAF-204ENST00000570798 ACER1Q8TDN7 264 aa21.6■■□□□ 1.05
LITAF-204ENST00000570798 CCDC17Q96LX7 622 aa21.6■■□□□ 1.05
LITAF-204ENST00000570798 KIAA1683Q9H0B3 1180 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms