RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 OSBPP22059 807 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 USP5P45974 858 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 HMGCS2P54868 508 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 PRMT2P55345 433 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 CRACR2BQ8N4Y2 399 aaPredicted RBP18.3■□□□□ 0.52
RAB40B-203ENST00000570676 EHD4Q9H223 541 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 AS3MTQ9HBK9 375 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 SRRDQ9UH36 339 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 ZBTB21Q9ULJ3 1066 aa18.3■□□□□ 0.52
RAB40B-203ENST00000570676 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 DOCK3Q8IZD9 2030 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 ASNSP08243 561 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 ATP5JP18859 108 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 SLC9C2Q5TAH2 1124 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 WDR18Q9BV38 432 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 LRRCC1Q9C099 1032 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
RAB40B-203ENST00000570676 PLXNB2O15031 1838 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 MYPNQ86TC9 1320 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 MTMR2Q13614 643 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 SMCR8Q8TEV9 937 aaPredicted RBP18.28■□□□□ 0.52
RAB40B-203ENST00000570676 SH3TC2Q8TF17 1288 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 TRIM34Q9BYJ4 488 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 BOLA2Q9H3K6 86 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 GINM1Q9NU53 330 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 PAG1Q9NWQ8 432 aa18.28■□□□□ 0.52
RAB40B-203ENST00000570676 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 SMARCA5O60264 1052 aaPredicted RBP18.27■□□□□ 0.52
RAB40B-203ENST00000570676 FMNL1O95466 1100 aaPredicted RBP18.27■□□□□ 0.52
RAB40B-203ENST00000570676 FCGRTP55899 365 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 PRKCZQ05513 592 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 TATDN1Q6P1N9 297 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 LCORLQ8N3X6 602 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 HAUS7Q99871 368 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 PNMA3Q9UL41 463 aa18.27■□□□□ 0.52
RAB40B-203ENST00000570676 ADD2P35612 726 aa18.26■□□□□ 0.51
RAB40B-203ENST00000570676 BACE1P56817 501 aa18.26■□□□□ 0.51
RAB40B-203ENST00000570676 NBPF11Q86T75 865 aa18.26■□□□□ 0.51
RAB40B-203ENST00000570676 CHGBP05060 677 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 HOXD10P28358 340 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 PLCD1P51178 756 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 EVX2Q03828 476 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 FAM110CQ1W6H9 321 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 SLFNL1Q499Z3 407 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 ANKRD45Q5TZF3 282 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 ANKRD13CQ8N6S4 541 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 CRNKL1Q9BZJ0 848 aaKnown RBP18.25■□□□□ 0.51
RAB40B-203ENST00000570676 ASCC2Q9H1I8 757 aaPredicted RBP18.25■□□□□ 0.51
RAB40B-203ENST00000570676 GABRQQ9UN88 632 aa18.25■□□□□ 0.51
RAB40B-203ENST00000570676 GH2P01242 217 aa18.24■□□□□ 0.51
RAB40B-203ENST00000570676 EN2P19622 333 aaPredicted RBP18.24■□□□□ 0.51
RAB40B-203ENST00000570676 SHMT1P34896 483 aa18.24■□□□□ 0.51
RAB40B-203ENST00000570676 GABPAQ06546 454 aa18.24■□□□□ 0.51
RAB40B-203ENST00000570676 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
RAB40B-203ENST00000570676 SDR42E1Q8WUS8 393 aa18.24■□□□□ 0.51
RAB40B-203ENST00000570676 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
RAB40B-203ENST00000570676 CENPFP49454 3210 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 C19orf81C9J6K1 198 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 USP17L10C9JJH3 530 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 GRK4P32298 578 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 NUCB1Q02818 461 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 TMEM106CQ9BVX2 250 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 ARMT1Q9H993 441 aa18.23■□□□□ 0.51
RAB40B-203ENST00000570676 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
RAB40B-203ENST00000570676 BRCA2P51587 3418 aa18.22■□□□□ 0.51
RAB40B-203ENST00000570676 TNPO2O14787 897 aaKnown RBP18.22■□□□□ 0.51
RAB40B-203ENST00000570676 MBD4O95243 580 aa18.22■□□□□ 0.51
RAB40B-203ENST00000570676 MYCP01106 439 aaPredicted RBP18.22■□□□□ 0.51
RAB40B-203ENST00000570676 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
RAB40B-203ENST00000570676 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
RAB40B-203ENST00000570676 MTFR1Q15390 333 aa18.22■□□□□ 0.51
RAB40B-203ENST00000570676 MCM9Q9NXL9 1143 aa18.22■□□□□ 0.51
RAB40B-203ENST00000570676 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
RAB40B-203ENST00000570676 A0A0G2JMZ2 1700 aa18.22■□□□□ 0.51
RAB40B-203ENST00000570676 GREB1LQ9C091 1923 aaPredicted RBP18.21■□□□□ 0.51
RAB40B-203ENST00000570676 PARP14Q460N5 1801 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 PRKAB2O43741 272 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 CYP2D6P10635 497 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 FLT3LGP49771 235 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 UBE3CQ15386 1083 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 C12orf42Q96LP6 360 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAB40B-203ENST00000570676 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 MORF4L1Q9UBU8 362 aa18.21■□□□□ 0.51
RAB40B-203ENST00000570676 RLFQ13129 1914 aa18.2■□□□□ 0.5
RAB40B-203ENST00000570676 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
RAB40B-203ENST00000570676 GUCY1A2P33402 732 aa18.2■□□□□ 0.5
RAB40B-203ENST00000570676 IRX3P78415 501 aaPredicted RBP18.2■□□□□ 0.5
RAB40B-203ENST00000570676 ABCB5Q2M3G0 1257 aa18.2■□□□□ 0.5
RAB40B-203ENST00000570676 CERKLQ49MI3 558 aaPredicted RBP18.2■□□□□ 0.5
RAB40B-203ENST00000570676 PRPF38BQ5VTL8 546 aaKnown RBP18.2■□□□□ 0.5
RAB40B-203ENST00000570676 SLAIN1Q8ND83 568 aa18.2■□□□□ 0.5
RAB40B-203ENST00000570676 SHISA4Q96DD7 197 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms