RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 MROH7-TTC4A0A0A0MT08 1334 aa13.02□□□□□ -0.33
CTDNEP1-202ENST00000570380 GPR75-ASB3A0A0A6YYF3 556 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 DNM1LO00429 736 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 ZBTB22O15209 634 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 ZNF384Q8TF68 577 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 USP44Q9H0E7 712 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 ABCF2Q9UG63 623 aa13.01□□□□□ -0.33
CTDNEP1-202ENST00000570380 JAG1P78504 1218 aa13□□□□□ -0.33
CTDNEP1-202ENST00000570380 MAP2K5Q13163 448 aa13□□□□□ -0.33
CTDNEP1-202ENST00000570380 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
CTDNEP1-202ENST00000570380 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
CTDNEP1-202ENST00000570380 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
CTDNEP1-202ENST00000570380 PRDM5Q9NQX1 630 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-202ENST00000570380 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
CTDNEP1-202ENST00000570380 SMCHD1A6NHR9 2005 aa13□□□□□ -0.33
CTDNEP1-202ENST00000570380 CNGA1P29973 690 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 ADORA1P30542 326 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 MECOMQ03112 1051 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 RASGRF1Q13972 1273 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 GRIN2CQ14957 1233 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 GJC2Q5T442 439 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 MFSD14CQ5VZR4 134 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 CCDC102BQ68D86 513 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 SLC39A5Q6ZMH5 540 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 FAM122AQ96E09 287 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 SIL1Q9H173 461 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 CEP126Q9P2H0 1117 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 NDUFB9Q9Y6M9 179 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
CTDNEP1-202ENST00000570380 TCF20Q9UGU0 1960 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 PLXNA1Q9UIW2 1896 aa12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 TMEM265A0A087WTH1 108 aa12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 C19orf81C9J6K1 198 aa12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 MSCO60682 206 aa12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 SHROOM1Q2M3G4 852 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 SPTY2D1Q68D10 685 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 TRPV1Q8NER1 839 aa12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 HERC5Q9UII4 1024 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-202ENST00000570380 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 CNMDO75829 334 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 CIAO1O76071 339 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 ASNSP08243 561 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 CYP2C19P33261 490 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 SNX17Q15036 470 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 ZNFX1Q9P2E3 1918 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-202ENST00000570380 USP17L10C9JJH3 530 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 IGHA2P01877 340 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 HOXC6P09630 235 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 PTPREP23469 700 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 ITGB8P26012 769 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 EPHB4P54760 987 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 ARRDC4Q8NCT1 418 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 NPLOC4Q8TAT6 608 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 CWC22Q9HCG8 908 aaKnown RBP12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 EMILIN3Q9NT22 766 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 PI4KBQ9UBF8 816 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 RABGAP1Q9Y3P9 1069 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 BDP1A6H8Y1 2624 aa12.96□□□□□ -0.33
CTDNEP1-202ENST00000570380 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 MAP4K4O95819 1239 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 CYBAP13498 195 aa12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 TIMM10P62072 90 aa12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 ANO1Q5XXA6 986 aa12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 RNPC3Q96LT9 517 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-202ENST00000570380 KBTBD13C9JR72 458 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 LDHCP07864 332 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 DNAJB2P25686 324 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 IL15P40933 162 aaPredicted RBP12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 CCNA1P78396 465 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 GRB14Q14449 540 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 TEX11Q8IYF3 940 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 ATXN2LQ8WWM7 1075 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 ASB2Q96Q27 587 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 ZNF576Q9H609 170 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 ZNF236Q9UL36 1845 aa12.94□□□□□ -0.34
CTDNEP1-202ENST00000570380 GDF11O95390 407 aa12.93□□□□□ -0.34
CTDNEP1-202ENST00000570380 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms