RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 DNAJC18Q9H819 358 aa23.63■■□□□ 1.37
CDH11-218ENST00000569783 TLR7Q9NYK1 1049 aaKnown RBP23.63■■□□□ 1.37
CDH11-218ENST00000569783 ATAD5Q96QE3 1844 aa23.63■■□□□ 1.37
CDH11-218ENST00000569783 GDF11O95390 407 aa23.62■■□□□ 1.37
CDH11-218ENST00000569783 RLBP1P12271 317 aa23.62■■□□□ 1.37
CDH11-218ENST00000569783 USP5P45974 858 aa23.62■■□□□ 1.37
CDH11-218ENST00000569783 DYNLL1P63167 89 aaKnown RBP23.62■■□□□ 1.37
CDH11-218ENST00000569783 PAK6Q9NQU5 681 aaPredicted RBP23.62■■□□□ 1.37
CDH11-218ENST00000569783 HMGCRP04035 888 aa23.61■■□□□ 1.37
CDH11-218ENST00000569783 HOXA7P31268 230 aaPredicted RBP23.61■■□□□ 1.37
CDH11-218ENST00000569783 MAP3K12Q12852 859 aa23.61■■□□□ 1.37
CDH11-218ENST00000569783 CEP85Q6P2H3 762 aa23.61■■□□□ 1.37
CDH11-218ENST00000569783 MORF4L1Q9UBU8 362 aa23.61■■□□□ 1.37
CDH11-218ENST00000569783 ZBTB21Q9ULJ3 1066 aa23.61■■□□□ 1.37
CDH11-218ENST00000569783 TMED8Q6PL24 325 aaPredicted RBP23.6■■□□□ 1.37
CDH11-218ENST00000569783 CCAR1Q8IX12 1150 aaKnown RBP23.6■■□□□ 1.37
CDH11-218ENST00000569783 MAGEB6Q8N7X4 407 aa23.6■■□□□ 1.37
CDH11-218ENST00000569783 MIGA1Q8NAN2 632 aa23.6■■□□□ 1.37
CDH11-218ENST00000569783 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.6■■□□□ 1.37
CDH11-218ENST00000569783 EVI5O60447 810 aa23.59■■□□□ 1.37
CDH11-218ENST00000569783 HERVK_113P62684 666 aa23.59■■□□□ 1.37
CDH11-218ENST00000569783 JAG1P78504 1218 aa23.59■■□□□ 1.37
CDH11-218ENST00000569783 HSP90AB4PQ58FF6 505 aa23.59■■□□□ 1.37
CDH11-218ENST00000569783 AACSQ86V21 672 aa23.59■■□□□ 1.37
CDH11-218ENST00000569783 GPRC5AQ8NFJ5 357 aa23.59■■□□□ 1.37
CDH11-218ENST00000569783 P2RX7Q99572 595 aaKnown RBP23.59■■□□□ 1.37
CDH11-218ENST00000569783 GJD2Q9UKL4 321 aa23.59■■□□□ 1.37
CDH11-218ENST00000569783 GTF3C2Q8WUA4 911 aaPredicted RBP23.58■■□□□ 1.37
CDH11-218ENST00000569783 CRISPLD2Q9H0B8 497 aa23.58■■□□□ 1.37
CDH11-218ENST00000569783 HMX1Q9NP08 348 aaPredicted RBP23.58■■□□□ 1.37
CDH11-218ENST00000569783 EXOC6BQ9Y2D4 811 aa23.58■■□□□ 1.37
CDH11-218ENST00000569783 RPTORQ8N122 1335 aa23.58■■□□□ 1.36
CDH11-218ENST00000569783 SIPA1L1O43166 1804 aa23.57■■□□□ 1.36
CDH11-218ENST00000569783 USP17L2Q6R6M4 530 aa23.57■■□□□ 1.36
CDH11-218ENST00000569783 TTC6Q86TZ1 520 aa23.57■■□□□ 1.36
CDH11-218ENST00000569783 MIER1Q8N108 512 aa23.57■■□□□ 1.36
CDH11-218ENST00000569783 SOCS4Q8WXH5 440 aa23.57■■□□□ 1.36
CDH11-218ENST00000569783 FEZ1Q99689 392 aa23.57■■□□□ 1.36
CDH11-218ENST00000569783 NUDT12Q9BQG2 462 aa23.57■■□□□ 1.36
CDH11-218ENST00000569783 RBM27Q9P2N5 1060 aaKnown RBP23.57■■□□□ 1.36
CDH11-218ENST00000569783 GH2P01242 217 aa23.56■■□□□ 1.36
CDH11-218ENST00000569783 MS4A1P11836 297 aa23.56■■□□□ 1.36
CDH11-218ENST00000569783 PDE3AQ14432 1141 aa23.56■■□□□ 1.36
CDH11-218ENST00000569783 SHROOM1Q2M3G4 852 aaPredicted RBP23.56■■□□□ 1.36
CDH11-218ENST00000569783 NECAB2Q7Z6G3 386 aa23.56■■□□□ 1.36
CDH11-218ENST00000569783 PAWRQ96IZ0 340 aaKnown RBP23.56■■□□□ 1.36
CDH11-218ENST00000569783 ANTXR1Q9H6X2 564 aa23.56■■□□□ 1.36
CDH11-218ENST00000569783 SERPINB13Q9UIV8 391 aa23.56■■□□□ 1.36
CDH11-218ENST00000569783 NDUFB9Q9Y6M9 179 aa23.56■■□□□ 1.36
CDH11-218ENST00000569783 CYP2B6P20813 491 aa23.55■■□□□ 1.36
CDH11-218ENST00000569783 MAPK4P31152 587 aa23.55■■□□□ 1.36
CDH11-218ENST00000569783 TTF1Q15361 905 aaPredicted RBP23.55■■□□□ 1.36
CDH11-218ENST00000569783 ANKLE1Q8NAG6 615 aa23.55■■□□□ 1.36
CDH11-218ENST00000569783 PAGR1Q9BTK6 254 aa23.55■■□□□ 1.36
CDH11-218ENST00000569783 EHD4Q9H223 541 aa23.55■■□□□ 1.36
CDH11-218ENST00000569783 CWC22Q9HCG8 908 aaKnown RBP23.55■■□□□ 1.36
CDH11-218ENST00000569783 FOCADQ5VW36 1801 aa23.54■■□□□ 1.36
CDH11-218ENST00000569783 TATDN1Q6P1N9 297 aa23.54■■□□□ 1.36
CDH11-218ENST00000569783 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
CDH11-218ENST00000569783 TXNRD2Q9NNW7 524 aa23.54■■□□□ 1.36
CDH11-218ENST00000569783 EMILIN3Q9NT22 766 aa23.54■■□□□ 1.36
CDH11-218ENST00000569783 DOCK3Q8IZD9 2030 aa23.54■■□□□ 1.36
CDH11-218ENST00000569783 USP14P54578 494 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 ERVK-9P63128 1117 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 ERVK-24P63145 666 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 RAB3GAP1Q15042 981 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 CERKLQ49MI3 558 aaPredicted RBP23.53■■□□□ 1.36
CDH11-218ENST00000569783 TRMT44Q8IYL2 757 aaKnown RBP23.53■■□□□ 1.36
CDH11-218ENST00000569783 IL1RAPL2Q9NP60 686 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 CABP5Q9NP86 173 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 RBPJLQ9UBG7 517 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 CDK5RAP2Q96SN8 1893 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 MYO5AQ9Y4I1 1855 aaKnown RBP23.53■■□□□ 1.36
CDH11-218ENST00000569783 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
CDH11-218ENST00000569783 XRCC5P13010 732 aaKnown RBP23.52■■□□□ 1.36
CDH11-218ENST00000569783 ZYXQ15942 572 aaKnown RBP23.52■■□□□ 1.36
CDH11-218ENST00000569783 ABCB5Q2M3G0 1257 aa23.52■■□□□ 1.36
CDH11-218ENST00000569783 DIEXFQ68CQ4 756 aaKnown RBP23.52■■□□□ 1.36
CDH11-218ENST00000569783 CLASRPQ8N2M8 674 aaKnown RBP23.52■■□□□ 1.36
CDH11-218ENST00000569783 RHPN1Q8TCX5 695 aa23.52■■□□□ 1.36
CDH11-218ENST00000569783 TRIB2Q92519 343 aa23.52■■□□□ 1.36
CDH11-218ENST00000569783 CEP290O15078 2479 aa23.52■■□□□ 1.36
CDH11-218ENST00000569783 MAGEB6P1A0A0J9YX57 407 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L15C9J2P7 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L13C9JLJ4 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L11C9JVI0 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L18D6R9N7 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L22D6RA61 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L17D6RBQ6 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L19D6RCP7 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L20D6RJB6 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 PEX10O60683 326 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 POLR3DP05423 398 aaPredicted RBP23.51■■□□□ 1.35
CDH11-218ENST00000569783 USP17L24Q0WX57 530 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 TRIM32Q13049 653 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 C12orf42Q96LP6 360 aa23.51■■□□□ 1.35
CDH11-218ENST00000569783 HMMRO75330 724 aa23.5■■□□□ 1.35
CDH11-218ENST00000569783 ZKSCAN1P17029 563 aaPredicted RBP23.5■■□□□ 1.35
CDH11-218ENST00000569783 CCNA1P78396 465 aa23.5■■□□□ 1.35
CDH11-218ENST00000569783 Q3C1V9 767 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms