RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 SLC12A5Q9H2X9 1139 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 STARD13Q9Y3M8 1113 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 CHD4Q14839 1912 aa7.84□□□□□ -1.16
GDE1-204ENST00000569773 DOT1LQ8TEK3 1739 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 RNF225M0QZC1 329 aaPredicted RBP7.83□□□□□ -1.16
GDE1-204ENST00000569773 AMPD1P23109 780 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 FGD1P98174 961 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 CHSY3Q70JA7 882 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 SVOPQ8N4V2 548 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 NUDT8Q8WV74 236 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 PLD4Q96BZ4 506 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 FAM161BQ96MY7 647 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 HHIPQ96QV1 700 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 PDGFDQ9GZP0 370 aaPredicted RBP7.83□□□□□ -1.16
GDE1-204ENST00000569773 DZANK1Q9NVP4 752 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 PARP2Q9UGN5 583 aa7.83□□□□□ -1.16
GDE1-204ENST00000569773 KCNQ2O43526 872 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 ALBP02768 609 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 MAP3K10Q02779 954 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.82□□□□□ -1.16
GDE1-204ENST00000569773 MICALL1Q8N3F8 863 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 BTBD6Q96KE9 485 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 PBX4Q9BYU1 374 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 EHD4Q9H223 541 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 LRRC4BQ9NT99 713 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 ANKRD26Q9UPS8 1709 aa7.82□□□□□ -1.16
GDE1-204ENST00000569773 TAF1LQ8IZX4 1826 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 NFKBIEO00221 500 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 RGS9O75916 674 aaPredicted RBP7.81□□□□□ -1.16
GDE1-204ENST00000569773 PRELPP51888 382 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 KCNMA1Q12791 1236 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 GRM2Q14416 872 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 TXNRD1Q16881 649 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 KIAA0319Q5VV43 1072 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 CEP135Q66GS9 1140 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 SUV39H2Q9H5I1 410 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 LIN7BQ9HAP6 207 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 JPH1Q9HDC5 661 aaPredicted RBP7.81□□□□□ -1.16
GDE1-204ENST00000569773 FRRS1LQ9P0K9 344 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 TONSLQ96HA7 1378 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 NINLQ9Y2I6 1382 aa7.81□□□□□ -1.16
GDE1-204ENST00000569773 ITGB4P16144 1822 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 M0R082 166 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 EXOC5O00471 708 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 SMNDC1O75940 238 aaKnown RBP eCLIP7.8□□□□□ -1.16
GDE1-204ENST00000569773 GNA15P30679 374 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 RBM25P49756 843 aaKnown RBP7.8□□□□□ -1.16
GDE1-204ENST00000569773 NXPE4Q6UWF7 544 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 C20orf204Q6ZNR8 217 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 ZNF417Q8TAU3 575 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 ZNF587Q96SQ5 575 aaPredicted RBP7.8□□□□□ -1.16
GDE1-204ENST00000569773 BCO2Q9BYV7 579 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 OSBPL7Q9BZF2 842 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 SPON1Q9HCB6 807 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 TRIM33Q9UPN9 1127 aa7.8□□□□□ -1.16
GDE1-204ENST00000569773 MAP2P11137 1827 aaKnown RBP7.8□□□□□ -1.16
GDE1-204ENST00000569773 PKD1L3Q7Z443 1732 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 TOGARAM1Q9Y4F4 1720 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 ST20-MTHFSA0A0A6YYL1 179 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 UNCXA6NJT0 531 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 PDE2AO00408 941 aaPredicted RBP7.79□□□□□ -1.16
GDE1-204ENST00000569773 IL2RBP14784 551 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 DAB2P98082 770 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 PSMD2Q13200 908 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 KANK3Q6NY19 840 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 ADAMTSL4Q6UY14 1074 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 HDGFL2Q7Z4V5 671 aaPredicted RBP7.79□□□□□ -1.16
GDE1-204ENST00000569773 TMEM102Q8N9M5 508 aaPredicted RBP7.79□□□□□ -1.16
GDE1-204ENST00000569773 NEDD1Q8NHV4 660 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 ANKRD24Q8TF21 1146 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 IP6K1Q92551 441 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 TCF12Q99081 682 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 POP1Q99575 1024 aaKnown RBP7.79□□□□□ -1.16
GDE1-204ENST00000569773 TERF2IPQ9NYB0 399 aa7.79□□□□□ -1.16
GDE1-204ENST00000569773 MEGF6O75095 1541 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 METTL12A8MUP2 240 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 SLC15A2Q16348 729 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 GDF6Q6KF10 455 aaPredicted RBP7.78□□□□□ -1.16
GDE1-204ENST00000569773 TMC4Q7Z404 712 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 GLIS3Q8NEA6 775 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 ASAP3Q8TDY4 903 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
GDE1-204ENST00000569773 LACRTQ9GZZ8 138 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 NSD2O96028 1365 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 ANKRD36BQ8N2N9 1353 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 MAP3K19Q56UN5 1328 aa7.78□□□□□ -1.16
GDE1-204ENST00000569773 C5P01031 1676 aa7.77□□□□□ -1.17
GDE1-204ENST00000569773 LILRB5O75023 590 aa7.77□□□□□ -1.17
GDE1-204ENST00000569773 ARHGEF15O94989 841 aa7.77□□□□□ -1.17
GDE1-204ENST00000569773 FBLN1P23142 703 aa7.77□□□□□ -1.17
GDE1-204ENST00000569773 HOXC9P31274 260 aa7.77□□□□□ -1.17
GDE1-204ENST00000569773 GRIA4P48058 902 aa7.77□□□□□ -1.17
GDE1-204ENST00000569773 AFF1P51825 1210 aaKnown RBP7.77□□□□□ -1.17
GDE1-204ENST00000569773 GRIK5Q16478 980 aa7.77□□□□□ -1.17
GDE1-204ENST00000569773 TTC9Q92623 222 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms