RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 CASZ1Q86V15 1759 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 CCAR1Q8IX12 1150 aaKnown RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 AMOTL1Q8IY63 956 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 CEP57L1Q8IYX8 460 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 TAF1LQ8IZX4 1826 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 FAM177A1Q8N128 213 aaPredicted RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 FSIP1Q8NA03 581 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 BBXQ8WY36 941 aaPredicted RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 FAM212AQ96EL1 285 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 GJD4Q96KN9 370 aaPredicted RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 TIGD1Q96MW7 591 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 RNF26Q9BY78 433 aaPredicted RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 BCL2L12Q9HB09 334 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 ATP8A2Q9NTI2 1148 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 ABCF2Q9UG63 623 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 HOOK1Q9UJC3 728 aaKnown RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 TRPC5Q9UL62 973 aaPredicted RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 MRVI1Q9Y6F6 885 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 GOLGB1Q14789 3259 aaKnown RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 COL1A1P02452 1464 aaPredicted RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 XDHP47989 1333 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 MYO1BO43795 1136 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ORC4O43929 436 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 OFD1O75665 1012 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 TPM2P07951 284 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 FGRP09769 529 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 CMA1P23946 247 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 CDC25BP30305 580 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ZNF165P49910 485 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 TPM4P67936 248 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 AKAP17AQ02040 695 aaKnown RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 GRAPQ13588 217 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 SLC39A14Q15043 492 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 NTRK3Q16288 839 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ANO6Q4KMQ2 910 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 SBK1Q52WX2 424 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 RILPL1Q5EBL4 403 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 TRAPPC3LQ5T215 181 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ANO1Q5XXA6 986 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 KRT40Q6A162 431 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 SARM1Q6SZW1 724 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ZNF804AQ7Z570 1209 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 CATIPQ7Z7H3 387 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ELOA2Q8IYF1 753 aaPredicted RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 CNBD1Q8NA66 436 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ENGASEQ8NFI3 743 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 WDR66Q8TBY9 1149 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 GRAPLQ8TC17 118 aaPredicted RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 FAM84BQ96KN1 310 aaPredicted RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 BPIFA3Q9BQP9 254 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 RIOK1Q9BRS2 568 aaKnown RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 FOXP1Q9H334 677 aaPredicted RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 BRMS1Q9HCU9 246 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 TOMM22Q9NS69 142 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
CDH13-213ENST00000569454 ZSWIM5Q9P217 1185 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 CEP131Q9UPN4 1083 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 MYH13Q9UKX3 1938 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 LAMB1P07942 1786 aa6.62□□□□□ -1.35
CDH13-213ENST00000569454 ROBO3Q96MS0 1386 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 TNKSO95271 1327 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 FAM237AA0A1B0GTK4 181 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 NEMFO60524 1076 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 CUTAO60888 179 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 MMP1P03956 469 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 LDHCP07864 332 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 GYG1P46976 350 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 ST5P78524 1137 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 GUCY1B3Q02153 619 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 PDE4BQ07343 736 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 SNW1Q13573 536 aaKnown RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 CAMK4Q16566 473 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 DZIP1Q86YF9 867 aaKnown RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 NOSTRINQ8IVI9 506 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 SLF2Q8IX21 1173 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 ZNF654Q8IZM8 581 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 FMR1NBQ8N0W7 255 aaPredicted RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 MIGA1Q8NAN2 632 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 CELF1Q92879 486 aaKnown RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 ARHGEF1Q92888 912 aaKnown RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 RNF166Q96A37 237 aaPredicted RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 NSUN4Q96CB9 384 aaKnown RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 PKNOX2Q96KN3 472 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 ZSCAN10Q96SZ4 725 aaPredicted RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 MAP3K14Q99558 947 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 SDF4Q9BRK5 362 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 ZNF287Q9HBT7 754 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 GPHNQ9NQX3 736 aaPredicted RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 PCDHA7Q9UN72 937 aa6.61□□□□□ -1.35
CDH13-213ENST00000569454 MYO5AQ9Y4I1 1855 aaKnown RBP6.61□□□□□ -1.35
CDH13-213ENST00000569454 SBF2Q86WG5 1849 aa6.6□□□□□ -1.35
CDH13-213ENST00000569454 SMTNL1A8MU46 457 aa6.6□□□□□ -1.35
CDH13-213ENST00000569454 BECN2A8MW95 431 aa6.6□□□□□ -1.35
CDH13-213ENST00000569454 BAG3O95817 575 aa6.6□□□□□ -1.35
CDH13-213ENST00000569454 CDC27P30260 824 aa6.6□□□□□ -1.35
CDH13-213ENST00000569454 KIF5BP33176 963 aa6.6□□□□□ -1.35
CDH13-213ENST00000569454 FOSBP53539 338 aa6.6□□□□□ -1.35
CDH13-213ENST00000569454 CEBPZQ03701 1054 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms