RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 SUCLG2Q96I99 432 aa11.38□□□□□ -0.59
TCF4-243ENST00000569357 RNPC3Q96LT9 517 aaKnown RBP11.38□□□□□ -0.59
TCF4-243ENST00000569357 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
TCF4-243ENST00000569357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.38□□□□□ -0.59
TCF4-243ENST00000569357 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
TCF4-243ENST00000569357 ATXN2LQ8WWM7 1075 aaKnown RBP11.37□□□□□ -0.59
TCF4-243ENST00000569357 ASB2Q96Q27 587 aa11.37□□□□□ -0.59
TCF4-243ENST00000569357 P2RX7Q99572 595 aaKnown RBP11.37□□□□□ -0.59
TCF4-243ENST00000569357 PAGR1Q9BTK6 254 aa11.37□□□□□ -0.59
TCF4-243ENST00000569357 THEGQ9P2T0 379 aa11.37□□□□□ -0.59
TCF4-243ENST00000569357 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
TCF4-243ENST00000569357 DNM1LO00429 736 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 SLC5A1P13866 664 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 MAPK4P31152 587 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 MAP3K10Q02779 954 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 PUM3Q15397 648 aaKnown RBP11.36□□□□□ -0.59
TCF4-243ENST00000569357 CCDC85BQ15834 202 aaPredicted RBP11.36□□□□□ -0.59
TCF4-243ENST00000569357 GJC2Q5T442 439 aaPredicted RBP11.36□□□□□ -0.59
TCF4-243ENST00000569357 WDR78Q5VTH9 848 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 MFSD14CQ5VZR4 134 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 APBA2Q99767 749 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 PORCNQ9H237 461 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 TXNRD2Q9NNW7 524 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 DDX20Q9UHI6 824 aaKnown RBP11.36□□□□□ -0.59
TCF4-243ENST00000569357 NDUFB9Q9Y6M9 179 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 EYSQ5T1H1 3165 aa11.36□□□□□ -0.59
TCF4-243ENST00000569357 TRIM60Q495X7 471 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 GPR142Q7Z601 462 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 SH3RF1Q7Z6J0 888 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 PLEKHH3Q7Z736 793 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 VGLL2Q8N8G2 317 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 LPAR1Q92633 364 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 GAS2L1Q99501 681 aaPredicted RBP11.35□□□□□ -0.59
TCF4-243ENST00000569357 C1QTNF1Q9BXJ1 281 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 ZNF576Q9H609 170 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
TCF4-243ENST00000569357 AS3MTQ9HBK9 375 aa11.35□□□□□ -0.59
TCF4-243ENST00000569357 DDX4Q9NQI0 724 aaKnown RBP11.35□□□□□ -0.59
TCF4-243ENST00000569357 SPTBN5Q9NRC6 3674 aaKnown RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 MSCO60682 206 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 ALDH1L1O75891 902 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 NBPF7P0C2Y1 421 aaPredicted RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 DNAJB2P25686 324 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 HERVK_113P62684 666 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 MRPS5P82675 430 aaKnown RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 MTMR2Q13614 643 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 Q3C1V9 767 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 MORN1Q5T089 497 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 ANO1Q5XXA6 986 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 SLC39A5Q6ZMH5 540 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 DZIP1Q86YF9 867 aaKnown RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 USP6NLQ92738 828 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 KAZALD1Q96I82 304 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 NECAB3Q96P71 396 aaPredicted RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 SRCIN1Q9C0H9 1055 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
TCF4-243ENST00000569357 HCN4Q9Y3Q4 1203 aa11.34□□□□□ -0.59
TCF4-243ENST00000569357 PTPRFP10586 1907 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 KBTBD13C9JR72 458 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 FGFR2P21802 821 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 BTDP43251 543 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 ERVK-9P63128 1117 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 ERVK-24P63145 666 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 ATP2B2Q01814 1243 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 MAP2K5Q13163 448 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 ARRDC4Q8NCT1 418 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 LPIN2Q92539 896 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 FERMT2Q96AC1 680 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 RBPJLQ9UBG7 517 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 DOCK1Q14185 1865 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 TTC28Q96AY4 2481 aa11.33□□□□□ -0.6
TCF4-243ENST00000569357 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.32□□□□□ -0.6
TCF4-243ENST00000569357 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.32□□□□□ -0.6
TCF4-243ENST00000569357 TRIM43BA6NCK2 446 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 TBC1D12O60347 775 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 IGFBP4P22692 258 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 CYP2C19P33261 490 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 CAP2P40123 477 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 EPHB4P54760 987 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 TRIM43Q96BQ3 446 aaPredicted RBP11.32□□□□□ -0.6
TCF4-243ENST00000569357 TIFAQ96CG3 184 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 PRDM12Q9H4Q4 367 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 ABCF2Q9UG63 623 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 PRUNE2Q8WUY3 3088 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
TCF4-243ENST00000569357 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
TCF4-243ENST00000569357 VAMP4O75379 141 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms