RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 HERVK_113P62684 666 aa14.76□□□□□ -0.05
VPS9D1-207ENST00000568691 PICALMQ13492 652 aa14.76□□□□□ -0.05
VPS9D1-207ENST00000568691 ATG9AQ7Z3C6 839 aa14.76□□□□□ -0.05
VPS9D1-207ENST00000568691 APBA2Q99767 749 aa14.76□□□□□ -0.05
VPS9D1-207ENST00000568691 PDLIM7Q9NR12 457 aa14.76□□□□□ -0.05
VPS9D1-207ENST00000568691 ATP11BQ9Y2G3 1177 aa14.76□□□□□ -0.05
VPS9D1-207ENST00000568691 RLFQ13129 1914 aa14.76□□□□□ -0.05
VPS9D1-207ENST00000568691 CAP2P40123 477 aa14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 PHKA1P46020 1223 aa14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 IRX6P78412 446 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 AAMPQ13685 434 aa14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 SNX17Q15036 470 aa14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 TRMT44Q8IYL2 757 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 GPRC5AQ8NFJ5 357 aa14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 LPIN2Q92539 896 aa14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 FAM163AQ96GL9 167 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 SRCIN1Q9C0H9 1055 aa14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 OSBPL5Q9H0X9 879 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 DDX20Q9UHI6 824 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-207ENST00000568691 MYH13Q9UKX3 1938 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 DNM1LO00429 736 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 CNMDO75829 334 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 RGS2P41220 211 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 BTDP43251 543 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 ERVK-9P63128 1117 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 ERVK-24P63145 666 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 PABPC4Q13310 644 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 MTMR2Q13614 643 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 TRIM60Q495X7 471 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 SLC4A10Q6U841 1118 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 SLC39A5Q6ZMH5 540 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 ADAMTS19Q8TE59 1207 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 LPAR1Q92633 364 aa14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS9D1-207ENST00000568691 MYH2Q9UKX2 1941 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 USP17L5A8MUK1 530 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 BCAR3O75815 825 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 SLC5A1P13866 664 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 MAPK4P31152 587 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 GJC2Q5T442 439 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 PLEKHH3Q7Z736 793 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 ASB2Q96Q27 587 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 WDR18Q9BV38 432 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 SMC4Q9NTJ3 1288 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 NDUFB9Q9Y6M9 179 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 XIRP2A4UGR9 3374 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 REV3LO60673 3130 aa14.73□□□□□ -0.05
VPS9D1-207ENST00000568691 SYNGAP1Q96PV0 1343 aa14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 EYA2O00167 538 aa14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 BACE1P56817 501 aa14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 IRX3P78415 501 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 MAP2K5Q13163 448 aa14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 NPLOC4Q8TAT6 608 aa14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 NECAB3Q96P71 396 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 PRDM5Q9NQX1 630 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
VPS9D1-207ENST00000568691 SIPA1L1O43166 1804 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 ATAD5Q96QE3 1844 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 CHD7Q9P2D1 2997 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 GPR75-ASB3A0A0A6YYF3 556 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 ZBTB22O15209 634 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 DNAJB2P25686 324 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 ADORA1P30542 326 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 CYP2C19P33261 490 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 ATXN2LQ8WWM7 1075 aaKnown RBP14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 DNAJC18Q9H819 358 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 PIEZO1Q92508 2521 aa14.71□□□□□ -0.05
VPS9D1-207ENST00000568691 MROH7-TTC4A0A0A0MT08 1334 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 IPO8O15397 1037 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 CYBAP13498 195 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 RASGRF1Q13972 1273 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 ADGRE1Q14246 886 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 ZKSCAN2Q63HK3 967 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 SSH1Q8WYL5 1049 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 ARHGAP45Q92619 1136 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 RNPC3Q96LT9 517 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 UHRF1Q96T88 793 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 PAGR1Q9BTK6 254 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 TBC1D2Q9BYX2 928 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 ZNF576Q9H609 170 aa14.7□□□□□ -0.06
VPS9D1-207ENST00000568691 HOXC6P09630 235 aa14.69□□□□□ -0.06
VPS9D1-207ENST00000568691 ANO1Q5XXA6 986 aa14.69□□□□□ -0.06
VPS9D1-207ENST00000568691 PPM1EQ8WY54 764 aa14.69□□□□□ -0.06
VPS9D1-207ENST00000568691 EMILIN3Q9NT22 766 aa14.69□□□□□ -0.06
VPS9D1-207ENST00000568691 DENND2AQ9ULE3 1009 aa14.69□□□□□ -0.06
VPS9D1-207ENST00000568691 PTPREP23469 700 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 CNGA1P29973 690 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 MECOMQ03112 1051 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 TLE2Q04725 743 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 MFSD14CQ5VZR4 134 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 CRBNQ96SW2 442 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 USP44Q9H0E7 712 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 THEGQ9P2T0 379 aa14.68□□□□□ -0.06
VPS9D1-207ENST00000568691 SEMA3EO15041 775 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 MSCO60682 206 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 PBX2P40425 430 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 ADCYAP1R1P41586 468 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms