RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 SRGAP1Q7Z6B7 1085 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 NAA15Q9BXJ9 866 aaKnown RBP24.56■■□□□ 1.52
DENND4A-208ENST00000568515 PAPPAQ13219 1627 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 ATF3P18847 181 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 ARID4AP29374 1257 aaPredicted RBP24.56■■□□□ 1.52
DENND4A-208ENST00000568515 CHMP4BP1P59074 171 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 RAD9BQ6WBX8 426 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 PPFIBP1Q86W92 1011 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 CSRNP2Q9H175 543 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 CEP131Q9UPN4 1083 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 TNS2Q63HR2 1409 aa24.56■■□□□ 1.52
DENND4A-208ENST00000568515 PDE8BO95263 885 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 AKNAD1Q5T1N1 836 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 KRT23Q9C075 422 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 ZSWIM4Q9H7M6 989 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 CDHR2Q9BYE9 1310 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 UQCRFS1P1P0C7P4 283 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 ATP2B1P20020 1258 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 RBL2Q08999 1139 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 SPATA1Q5VX52 437 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 CCDC82Q8N4S0 544 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 IGSF22Q8N9C0 903 aa24.55■■□□□ 1.52
DENND4A-208ENST00000568515 DEXIO95424 95 aa24.54■■□□□ 1.52
DENND4A-208ENST00000568515 CT47A1Q5JQC4 288 aaPredicted RBP24.54■■□□□ 1.52
DENND4A-208ENST00000568515 CRACR2BQ8N4Y2 399 aaPredicted RBP24.54■■□□□ 1.52
DENND4A-208ENST00000568515 MFSD6Q6ZSS7 791 aa24.54■■□□□ 1.52
DENND4A-208ENST00000568515 TNS3Q68CZ2 1445 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 MAP2K7O14733 419 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 KIF5CO60282 957 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 MBD4O95243 580 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 MUM1L1Q5H9M0 696 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 CPLX3Q8WVH0 158 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 CDC23Q9UJX2 597 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 CAPN2P17655 700 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 CTSWP56202 376 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 OXER1Q8TDS5 423 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 ZKSCAN3Q9BRR0 538 aa24.53■■□□□ 1.52
DENND4A-208ENST00000568515 A0A0U1RQJ8 604 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 PBX1P40424 430 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 WTAPQ15007 396 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 TOM1L2Q6ZVM7 507 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 CMTR1Q8N1G2 835 aaKnown RBP24.52■■□□□ 1.52
DENND4A-208ENST00000568515 CEP112Q8N8E3 955 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 ATRIPQ8WXE1 791 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 CABP5Q9NP86 173 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 STRN4Q9NRL3 753 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 ADD3Q9UEY8 706 aaKnown RBP24.52■■□□□ 1.52
DENND4A-208ENST00000568515 RRP12Q5JTH9 1297 aaKnown RBP24.52■■□□□ 1.52
DENND4A-208ENST00000568515 BBXQ8WY36 941 aaPredicted RBP24.52■■□□□ 1.52
DENND4A-208ENST00000568515 PUF60Q9UHX1 559 aaKnown RBP24.52■■□□□ 1.52
DENND4A-208ENST00000568515 CHD4Q14839 1912 aa24.52■■□□□ 1.52
DENND4A-208ENST00000568515 GPTP24298 496 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 SART3Q15020 963 aaKnown RBP24.51■■□□□ 1.51
DENND4A-208ENST00000568515 KLHL10Q6JEL2 608 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 GIGYF2Q6Y7W6 1299 aaKnown RBP24.51■■□□□ 1.51
DENND4A-208ENST00000568515 MAGEB6Q8N7X4 407 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 HNRNPLLQ8WVV9 542 aaKnown RBP24.51■■□□□ 1.51
DENND4A-208ENST00000568515 TRERF1Q96PN7 1200 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 ANKZF1Q9H8Y5 726 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 ARMT1Q9H993 441 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 GSG1L2A8MUP6 293 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 H3BQF6 201 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 CD44P16070 742 aaKnown RBP24.51■■□□□ 1.51
DENND4A-208ENST00000568515 STX17P56962 302 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 CUL4BQ13620 913 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 RASGRP2Q7LDG7 609 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 NLRP10Q86W26 655 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 WDR17Q8IZU2 1322 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 SYNRGQ9UMZ2 1314 aa24.51■■□□□ 1.51
DENND4A-208ENST00000568515 CCDC196A0A1B0GTZ2 297 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 GYS2P54840 703 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 RAD51AP2Q09MP3 1159 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 EXOC4Q96A65 974 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 TOMM22Q9NS69 142 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 AATFQ9NY61 560 aaKnown RBP eCLIP24.5■■□□□ 1.51
DENND4A-208ENST00000568515 ADAM21Q9UKJ8 722 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 GTF2E1P29083 439 aaPredicted RBP24.5■■□□□ 1.51
DENND4A-208ENST00000568515 AFMP43652 599 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 TUBB2AQ13885 445 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 ZNF569Q5MCW4 686 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 CDKAL1Q5VV42 579 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 AK7Q96M32 723 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 TUBB2BQ9BVA1 445 aa24.5■■□□□ 1.51
DENND4A-208ENST00000568515 A0A087X0B3 334 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 MFAP3LO75121 409 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 MAP3K12Q12852 859 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 HLFQ16534 295 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 STAG1Q8WVM7 1258 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 CTAGE1Q96RT6 745 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 PSD3Q9NYI0 1048 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 RAB21Q9UL25 225 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 ERICH2A1L162 156 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 POTEB2H3BUK9 544 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 BEND6Q5SZJ8 279 aaPredicted RBP24.49■■□□□ 1.51
DENND4A-208ENST00000568515 DNAJC10Q8IXB1 793 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 SPATA5Q8NB90 893 aa24.49■■□□□ 1.51
DENND4A-208ENST00000568515 FILIP1LQ4L180 1135 aa24.48■■□□□ 1.51
DENND4A-208ENST00000568515 SH3RF1Q7Z6J0 888 aa24.48■■□□□ 1.51
DENND4A-208ENST00000568515 TMTC2Q8N394 836 aa24.48■■□□□ 1.51
DENND4A-208ENST00000568515 FANCBQ8NB91 859 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms