RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CTGFP29279 349 aa17.46■□□□□ 0.39
CMTM3-215ENST00000568477 FCGRTP55899 365 aa17.46■□□□□ 0.39
CMTM3-215ENST00000568477 JAG1P78504 1218 aa17.46■□□□□ 0.39
CMTM3-215ENST00000568477 SH3D19Q5HYK7 790 aa17.46■□□□□ 0.39
CMTM3-215ENST00000568477 SRRDQ9UH36 339 aa17.46■□□□□ 0.39
CMTM3-215ENST00000568477 LOC285556D6RIA3 1793 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-215ENST00000568477 OSBPP22059 807 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 ADD2P35612 726 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 BACE1P56817 501 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 MTMR2Q13614 643 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 SHROOM1Q2M3G4 852 aaPredicted RBP17.45■□□□□ 0.38
CMTM3-215ENST00000568477 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 ZNF333Q96JL9 665 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
CMTM3-215ENST00000568477 GH2P01242 217 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 TATDN1Q6P1N9 297 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 TMEM106CQ9BVX2 250 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 MCM9Q9NXL9 1143 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 PCDHB15Q9Y5E8 787 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 MYPNQ86TC9 1320 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
CMTM3-215ENST00000568477 C19orf81C9J6K1 198 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 USP17L10C9JJH3 530 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 MBD4O95243 580 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 GCLCP48506 637 aaPredicted RBP17.43■□□□□ 0.38
CMTM3-215ENST00000568477 PLCD1P51178 756 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 RAET1EQ8TD07 263 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 SH3TC2Q8TF17 1288 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 SDR42E1Q8WUS8 393 aa17.43■□□□□ 0.38
CMTM3-215ENST00000568477 DDX60LQ5H9U9 1706 aaKnown RBP17.43■□□□□ 0.38
CMTM3-215ENST00000568477 POTEFA5A3E0 1075 aa17.42■□□□□ 0.38
CMTM3-215ENST00000568477 IRX3P78415 501 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-215ENST00000568477 UBE3CQ15386 1083 aa17.42■□□□□ 0.38
CMTM3-215ENST00000568477 FAM110CQ1W6H9 321 aa17.42■□□□□ 0.38
CMTM3-215ENST00000568477 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
CMTM3-215ENST00000568477 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-215ENST00000568477 ANKRD13CQ8N6S4 541 aa17.42■□□□□ 0.38
CMTM3-215ENST00000568477 ASCC2Q9H1I8 757 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-215ENST00000568477 DCP1AQ9NPI6 582 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-215ENST00000568477 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
CMTM3-215ENST00000568477 TNPO2O14787 897 aaKnown RBP17.41■□□□□ 0.38
CMTM3-215ENST00000568477 SHMT1P34896 483 aa17.41■□□□□ 0.38
CMTM3-215ENST00000568477 PRKCZQ05513 592 aa17.41■□□□□ 0.38
CMTM3-215ENST00000568477 ABCB5Q2M3G0 1257 aa17.41■□□□□ 0.38
CMTM3-215ENST00000568477 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
CMTM3-215ENST00000568477 FEZ1Q99689 392 aa17.41■□□□□ 0.38
CMTM3-215ENST00000568477 CABP5Q9NP86 173 aa17.41■□□□□ 0.38
CMTM3-215ENST00000568477 ATP8A2Q9NTI2 1148 aa17.41■□□□□ 0.38
CMTM3-215ENST00000568477 PRKAB2O43741 272 aa17.4■□□□□ 0.38
CMTM3-215ENST00000568477 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-215ENST00000568477 GRK4P32298 578 aa17.4■□□□□ 0.38
CMTM3-215ENST00000568477 GABPAQ06546 454 aa17.4■□□□□ 0.38
CMTM3-215ENST00000568477 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
CMTM3-215ENST00000568477 USP17L2Q6R6M4 530 aa17.4■□□□□ 0.38
CMTM3-215ENST00000568477 MYH7P12883 1935 aa17.4■□□□□ 0.38
CMTM3-215ENST00000568477 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
CMTM3-215ENST00000568477 MYCP01106 439 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-215ENST00000568477 CHGBP05060 677 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 CYP2D6P10635 497 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 TSHZ3Q63HK5 1081 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 KBTBD3Q8NAB2 608 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 DDRGK1Q96HY6 314 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 MGAMO43451 1857 aa17.39■□□□□ 0.37
CMTM3-215ENST00000568477 TNRC18O15417 2968 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-215ENST00000568477 EVX2Q03828 476 aa17.38■□□□□ 0.37
CMTM3-215ENST00000568477 COA7Q96BR5 231 aa17.38■□□□□ 0.37
CMTM3-215ENST00000568477 EMILIN3Q9NT22 766 aa17.38■□□□□ 0.37
CMTM3-215ENST00000568477 SWAP70Q9UH65 585 aa17.38■□□□□ 0.37
CMTM3-215ENST00000568477 GABRQQ9UN88 632 aa17.38■□□□□ 0.37
CMTM3-215ENST00000568477 CENPFP49454 3210 aa17.38■□□□□ 0.37
CMTM3-215ENST00000568477 MPHOSPH10O00566 681 aaKnown RBP17.37■□□□□ 0.37
CMTM3-215ENST00000568477 ERC2O15083 957 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 EN2P19622 333 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-215ENST00000568477 FLT3LGP49771 235 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 USP14P54578 494 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 HERVK_113P62684 666 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 ZYXQ15942 572 aaKnown RBP17.37■□□□□ 0.37
CMTM3-215ENST00000568477 SLAIN1Q8ND83 568 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 P2RX7Q99572 595 aaKnown RBP17.37■□□□□ 0.37
CMTM3-215ENST00000568477 KIAA1683Q9H0B3 1180 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 PUS7LQ9H0K6 701 aaKnown RBP17.37■□□□□ 0.37
CMTM3-215ENST00000568477 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 BIN2Q9UBW5 565 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-215ENST00000568477 SLC4A4Q9Y6R1 1079 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
CMTM3-215ENST00000568477 SEPT2Q15019 361 aa17.36■□□□□ 0.37
CMTM3-215ENST00000568477 SLC44A5Q8NCS7 719 aa17.36■□□□□ 0.37
CMTM3-215ENST00000568477 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
CMTM3-215ENST00000568477 ZBTB47Q9UFB7 747 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L12C9JPN9 530 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 USP17L21D6R901 530 aa17.35■□□□□ 0.37
CMTM3-215ENST00000568477 RNF113AO15541 343 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms