RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RASA1P20936 1047 aa21.39■■□□□ 1.01
COMMD4-222ENST00000568034 GJA5P36382 358 aa21.39■■□□□ 1.01
COMMD4-222ENST00000568034 CERKLQ49MI3 558 aaPredicted RBP21.39■■□□□ 1.01
COMMD4-222ENST00000568034 NKX2-3Q8TAU0 364 aa21.39■■□□□ 1.01
COMMD4-222ENST00000568034 ELP3Q9H9T3 547 aa21.39■■□□□ 1.01
COMMD4-222ENST00000568034 CSADQ9Y600 493 aa21.39■■□□□ 1.01
COMMD4-222ENST00000568034 PHIPQ8WWQ0 1821 aa21.39■■□□□ 1.01
COMMD4-222ENST00000568034 SPDYE5A6NIY4 337 aa21.38■■□□□ 1.01
COMMD4-222ENST00000568034 FAM155AB1AL88 458 aaPredicted RBP21.38■■□□□ 1.01
COMMD4-222ENST00000568034 ZNF213O14771 459 aa21.38■■□□□ 1.01
COMMD4-222ENST00000568034 AKR1B1P15121 316 aa21.38■■□□□ 1.01
COMMD4-222ENST00000568034 GUCY1A2P33402 732 aa21.38■■□□□ 1.01
COMMD4-222ENST00000568034 NECTIN1Q15223 517 aa21.38■■□□□ 1.01
COMMD4-222ENST00000568034 IMMTQ16891 758 aaKnown RBP21.38■■□□□ 1.01
COMMD4-222ENST00000568034 STAG1Q8WVM7 1258 aa21.38■■□□□ 1.01
COMMD4-222ENST00000568034 ZBTB21Q9ULJ3 1066 aa21.38■■□□□ 1.01
COMMD4-222ENST00000568034 ORC4O43929 436 aa21.37■■□□□ 1.01
COMMD4-222ENST00000568034 GH2P01242 217 aa21.37■■□□□ 1.01
COMMD4-222ENST00000568034 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
COMMD4-222ENST00000568034 SLC10A3P09131 477 aa21.37■■□□□ 1.01
COMMD4-222ENST00000568034 DEFB115Q30KQ5 88 aa21.37■■□□□ 1.01
COMMD4-222ENST00000568034 CYP4F22Q6NT55 531 aa21.37■■□□□ 1.01
COMMD4-222ENST00000568034 CCDC84Q86UT8 332 aaPredicted RBP21.37■■□□□ 1.01
COMMD4-222ENST00000568034 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.37■■□□□ 1.01
COMMD4-222ENST00000568034 NEDD4P46934 1319 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 PTPRAP18433 802 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 ZNF157P51786 506 aaPredicted RBP21.36■■□□□ 1.01
COMMD4-222ENST00000568034 PDE4BQ07343 736 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 AKNAD1Q5T1N1 836 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 SLC10A4Q96EP9 437 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 WNK4Q96J92 1243 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 GINM1Q9NU53 330 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 PLIN4Q96Q06 1357 aa21.36■■□□□ 1.01
COMMD4-222ENST00000568034 SLC27A2O14975 620 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 REC8O95072 547 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 SEC24BO95487 1268 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 ASNSP08243 561 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 ABCB5Q2M3G0 1257 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 CREB3L3Q68CJ9 461 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 STOX1Q6ZVD7 989 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 ERO1BQ86YB8 467 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 OPTNQ96CV9 577 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 CCDC17Q96LX7 622 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
COMMD4-222ENST00000568034 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-222ENST00000568034 THSD7BQ9C0I4 1608 aa21.34■■□□□ 1.01
COMMD4-222ENST00000568034 EPB41L2O43491 1005 aaKnown RBP21.34■■□□□ 1.01
COMMD4-222ENST00000568034 SPRYD7Q5W111 196 aa21.34■■□□□ 1.01
COMMD4-222ENST00000568034 OTUD5Q96G74 571 aa21.34■■□□□ 1.01
COMMD4-222ENST00000568034 CAPNS2Q96L46 248 aa21.34■■□□□ 1.01
COMMD4-222ENST00000568034 ZNF287Q9HBT7 754 aa21.34■■□□□ 1.01
COMMD4-222ENST00000568034 PICK1Q9NRD5 415 aa21.34■■□□□ 1.01
COMMD4-222ENST00000568034 IGKV6D-41A0A0C4DH26 115 aa21.33■■□□□ 1.01
COMMD4-222ENST00000568034 PCP11498 1178 aaKnown RBP21.33■■□□□ 1.01
COMMD4-222ENST00000568034 PPATQ06203 517 aa21.33■■□□□ 1.01
COMMD4-222ENST00000568034 PPIL2Q13356 520 aa21.33■■□□□ 1.01
COMMD4-222ENST00000568034 SEPT2Q15019 361 aa21.33■■□□□ 1.01
COMMD4-222ENST00000568034 TMEM179Q6ZVK1 233 aa21.33■■□□□ 1.01
COMMD4-222ENST00000568034 KCNB2Q92953 911 aa21.33■■□□□ 1.01
COMMD4-222ENST00000568034 USP26Q9BXU7 913 aa21.33■■□□□ 1.01
COMMD4-222ENST00000568034 RNF41Q9H4P4 317 aaPredicted RBP21.33■■□□□ 1.01
COMMD4-222ENST00000568034 IRF6O14896 467 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 ZBTB48P10074 688 aaPredicted RBP21.32■■□□□ 1
COMMD4-222ENST00000568034 HSPA4P34932 840 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 VEGFBP49765 207 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 FAM47AQ5JRC9 791 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 MFSD6Q6ZSS7 791 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 CLEC10AQ8IUN9 316 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 CCDC102AQ96A19 550 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 ZIC5Q96T25 663 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 KCNH4Q9UQ05 1017 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 AFG3L2Q9Y4W6 797 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 ZHX2Q9Y6X8 837 aa21.32■■□□□ 1
COMMD4-222ENST00000568034 PTPRFP10586 1907 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 USP17L5A8MUK1 530 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 E7EWF7 191 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 MPHOSPH10O00566 681 aaKnown RBP21.31■■□□□ 1
COMMD4-222ENST00000568034 MKRN3Q13064 507 aaKnown RBP21.31■■□□□ 1
COMMD4-222ENST00000568034 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
COMMD4-222ENST00000568034 PAXIP1Q6ZW49 1069 aaPredicted RBP21.31■■□□□ 1
COMMD4-222ENST00000568034 SIAH1Q8IUQ4 282 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 RASEFQ8IZ41 740 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 ZNF444Q8N0Y2 327 aaPredicted RBP21.31■■□□□ 1
COMMD4-222ENST00000568034 NEDD1Q8NHV4 660 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 WDR18Q9BV38 432 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 CABP5Q9NP86 173 aa21.31■■□□□ 1
COMMD4-222ENST00000568034 TFAP4Q01664 338 aa21.3■■□□□ 1
COMMD4-222ENST00000568034 COL9A3Q14050 684 aaPredicted RBP21.3■■□□□ 1
COMMD4-222ENST00000568034 RAB3GAP1Q15042 981 aa21.3■■□□□ 1
COMMD4-222ENST00000568034 DNAJC5GQ8N7S2 189 aa21.3■■□□□ 1
COMMD4-222ENST00000568034 WDR33Q9C0J8 1336 aaKnown RBP21.29■■□□□ 1
COMMD4-222ENST00000568034 B4E1Z4 1266 aa21.29■■□□□ 1
COMMD4-222ENST00000568034 RANBP6O60518 1105 aaKnown RBP21.29■■□□□ 1
COMMD4-222ENST00000568034 AOC2O75106 756 aa21.29■■□□□ 1
COMMD4-222ENST00000568034 ECE1P42892 770 aa21.29■■□□□ 1
COMMD4-222ENST00000568034 TSGA10IPQ3SY00 556 aa21.29■■□□□ 1
COMMD4-222ENST00000568034 ACER1Q8TDN7 264 aa21.29■■□□□ 1
COMMD4-222ENST00000568034 MS4A4AQ96JQ5 239 aa21.29■■□□□ 1
COMMD4-222ENST00000568034 TOMM22Q9NS69 142 aa21.29■■□□□ 1
COMMD4-222ENST00000568034 A0A1W2PRG0 241 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms