RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.37□□□□□ -1.071e-7■■□□□ 13.4
SF3B3-209ENST00000567635 AGTPBP1Q9UPW5 1226 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
SF3B3-209ENST00000567635 C19orf81C9J6K1 198 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 SLC34A2O95436 690 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 POLR3DP05423 398 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-209ENST00000567635 BCRP11274 1271 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 ADD2P35612 726 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 HMGCS2P54868 508 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 RRP1P56182 461 aaKnown RBP8.36□□□□□ -1.07
SF3B3-209ENST00000567635 BACE1P56817 501 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 JAG1P78504 1218 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 PABPC4Q13310 644 aaKnown RBP eCLIP8.36□□□□□ -1.07
SF3B3-209ENST00000567635 SLC4A8Q2Y0W8 1093 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 SLC9C1Q4G0N8 1177 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 SH3D19Q5HYK7 790 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 TREML2Q5T2D2 321 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 ZSCAN25Q6NSZ9 544 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 TATDN1Q6P1N9 297 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 SMCR8Q8TEV9 937 aaPredicted RBP8.36□□□□□ -1.07
SF3B3-209ENST00000567635 ARMC5Q96C12 935 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 GPATCH3Q96I76 525 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 EHD4Q9H223 541 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 DNAJC18Q9H819 358 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 ECHDC1Q9NTX5 307 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 MCM9Q9NXL9 1143 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 SERPINB13Q9UIV8 391 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 PNMA3Q9UL41 463 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 PTCH2Q9Y6C5 1203 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 NAV1Q8NEY1 1877 aa8.36□□□□□ -1.07
SF3B3-209ENST00000567635 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 USP17L10C9JJH3 530 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 ECM2O94769 699 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-209ENST00000567635 GDF11O95390 407 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 GH2P01242 217 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 OSBPP22059 807 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 CTGFP29279 349 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 PLCD1P51178 756 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 FCGRTP55899 365 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 UBE3CQ15386 1083 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 CERKLQ49MI3 558 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-209ENST00000567635 TMOD4Q9NZQ9 345 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 SRRDQ9UH36 339 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 ZBTB21Q9ULJ3 1066 aa8.35□□□□□ -1.07
SF3B3-209ENST00000567635 RBBP6Q7Z6E9 1792 aaKnown RBP8.35□□□□□ -1.07
SF3B3-209ENST00000567635 MBD4O95243 580 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 HOXA7P31268 230 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-209ENST00000567635 GCLCP48506 637 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-209ENST00000567635 MTMR2Q13614 643 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 ABCB5Q2M3G0 1257 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 SHROOM1Q2M3G4 852 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-209ENST00000567635 SLFNL1Q499Z3 407 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 LCORLQ8N3X6 602 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 ANKRD13CQ8N6S4 541 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 RAET1EQ8TD07 263 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 SDR42E1Q8WUS8 393 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 ZNF333Q96JL9 665 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 CRBNQ96SW2 442 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 ASCC2Q9H1I8 757 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-209ENST00000567635 ARMT1Q9H993 441 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 CABP5Q9NP86 173 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 DCP1AQ9NPI6 582 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-209ENST00000567635 ATP8A2Q9NTI2 1148 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 TAOK2Q9UL54 1235 aa8.34□□□□□ -1.07
SF3B3-209ENST00000567635 ZNFX1Q9P2E3 1918 aaKnown RBP8.34□□□□□ -1.07
SF3B3-209ENST00000567635 POTEFA5A3E0 1075 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 CEP290O15078 2479 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 PRKAB2O43741 272 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 SHMT1P34896 483 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 IRX3P78415 501 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-209ENST00000567635 GABPAQ06546 454 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 SH3TC2Q8TF17 1288 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 P2RX7Q99572 595 aaKnown RBP8.33□□□□□ -1.08
SF3B3-209ENST00000567635 EMILIN3Q9NT22 766 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 PCDH10Q9P2E7 1040 aa8.33□□□□□ -1.08
SF3B3-209ENST00000567635 ZBTB47Q9UFB7 747 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-209ENST00000567635 TTC41PQ6P2S7 1318 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 MYPNQ86TC9 1320 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L21D6R901 530 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 ERC2O15083 957 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 RNF113AO15541 343 aaKnown RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 CHGBP05060 677 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 ZFYP08048 801 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 CYP2D6P10635 497 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 GRK4P32298 578 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 AAMPQ13685 434 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 FAM110CQ1W6H9 321 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 LRRFIP1Q32MZ4 808 aaKnown RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 ANKRD45Q5TZF3 282 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 TSHZ3Q63HK5 1081 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 AMOTL1Q8IY63 956 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 KBTBD3Q8NAB2 608 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 COA7Q96BR5 231 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms