RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 CAVIN1Q6NZI2 390 aaKnown RBP13.67□□□□□ -0.22
BBS4-213ENST00000567279 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
BBS4-213ENST00000567279 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 ZNF277Q9NRM2 450 aaPredicted RBP13.67□□□□□ -0.22
BBS4-213ENST00000567279 PIM2Q9P1W9 311 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 COL4A5P29400 1685 aa13.67□□□□□ -0.22
BBS4-213ENST00000567279 CCDC196A0A1B0GTZ2 297 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 WDHD1O75717 1129 aaPredicted RBP13.66□□□□□ -0.22
BBS4-213ENST00000567279 IFNAR1P17181 557 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 NT5C2P49902 561 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 RBM5P52756 815 aaKnown RBP eCLIP13.66□□□□□ -0.22
BBS4-213ENST00000567279 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 SOGA3Q5TF21 947 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 APOBEC3HQ6NTF7 200 aaKnown RBP13.66□□□□□ -0.22
BBS4-213ENST00000567279 CDC42EP5Q6NZY7 148 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 ZNF444Q8N0Y2 327 aaPredicted RBP13.66□□□□□ -0.22
BBS4-213ENST00000567279 FANCBQ8NB91 859 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 ALG1Q9BT22 464 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 ZNF287Q9HBT7 754 aa13.66□□□□□ -0.22
BBS4-213ENST00000567279 DDX4Q9NQI0 724 aaKnown RBP13.66□□□□□ -0.22
BBS4-213ENST00000567279 DDAH1O94760 285 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 FMNL1O95466 1100 aaPredicted RBP13.65□□□□□ -0.22
BBS4-213ENST00000567279 TSPY3P0CV98 308 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 TSPY8P0CW00 308 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 RASA1P20936 1047 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 CDK8P49336 464 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 ZDHHC15Q96MV8 337 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 RBM27Q9P2N5 1060 aaKnown RBP13.65□□□□□ -0.22
BBS4-213ENST00000567279 PCDHAC2Q9Y5I4 1007 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
BBS4-213ENST00000567279 CALM1P0DP23 149 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 CALM2P0DP24 149 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 CALM3P0DP25 149 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
BBS4-213ENST00000567279 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
BBS4-213ENST00000567279 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
BBS4-213ENST00000567279 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.228e-7■■■□□ 14.9
BBS4-213ENST00000567279 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.23
BBS4-213ENST00000567279 HDLBPQ00341 1268 aaKnown RBP13.64□□□□□ -0.23
BBS4-213ENST00000567279 TTC6Q86TZ1 520 aa13.64□□□□□ -0.23
BBS4-213ENST00000567279 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
BBS4-213ENST00000567279 OSBPL5Q9H0X9 879 aaPredicted RBP13.64□□□□□ -0.23
BBS4-213ENST00000567279 RBM28Q9NW13 759 aaKnown RBP13.64□□□□□ -0.23
BBS4-213ENST00000567279 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
BBS4-213ENST00000567279 RAD17O75943 681 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 UBE2HP62256 183 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 TROAPQ12815 778 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 TRIM29Q14134 588 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 CCDC178Q5BJE1 867 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 RCSD1Q6JBY9 416 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 WASF1Q92558 559 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 KAT14Q9H8E8 782 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 SERPINA10Q9UK55 444 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 UBE2Q2LH0YL09 131 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 PLEKHA8P1O95397 391 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 CACNB3P54284 484 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 NFIAQ12857 509 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 KRT40Q6A162 431 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 NBPF11Q86T75 865 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 NIM1KQ8IY84 436 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 CRACR2BQ8N4Y2 399 aaPredicted RBP13.63□□□□□ -0.23
BBS4-213ENST00000567279 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
BBS4-213ENST00000567279 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
BBS4-213ENST00000567279 SIPA1L1O43166 1804 aa13.63□□□□□ -0.23
BBS4-213ENST00000567279 MYO3BQ8WXR4 1341 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 PSMD14O00487 310 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 DEXIO95424 95 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 HLA-DOAP06340 250 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
BBS4-213ENST00000567279 DGKHQ86XP1 1220 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 LEO1Q8WVC0 666 aaPredicted RBP13.62□□□□□ -0.23
BBS4-213ENST00000567279 ZNF396Q96N95 335 aaPredicted RBP13.62□□□□□ -0.23
BBS4-213ENST00000567279 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 ELP1O95163 1332 aa13.62□□□□□ -0.23
BBS4-213ENST00000567279 KIF28PB7ZC32 967 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
BBS4-213ENST00000567279 KIF23Q02241 960 aaPredicted RBP13.61□□□□□ -0.23
BBS4-213ENST00000567279 TMTC3Q6ZXV5 915 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 PNMA1Q8ND90 353 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 TMEM63CQ9P1W3 806 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 CFAP45Q9UL16 551 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 STX8Q9UNK0 236 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
BBS4-213ENST00000567279 GABPAQ06546 454 aa13.61□□□□□ -0.23
BBS4-213ENST00000567279 GNL2Q13823 731 aaKnown RBP13.61□□□□□ -0.23
BBS4-213ENST00000567279 ZSCAN23Q3MJ62 389 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms