RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 FAM43AQ8N2R8 423 aa25.94■■□□□ 1.74
NME3-210ENST00000567271 HELLSQ9NRZ9 838 aa25.94■■□□□ 1.74
NME3-210ENST00000567271 TAOK2Q9UL54 1235 aa25.94■■□□□ 1.74
NME3-210ENST00000567271 BAZ2AQ9UIF9 1905 aaKnown RBP25.93■■□□□ 1.74
NME3-210ENST00000567271 CYP2D7A0A087X1C5 515 aa25.93■■□□□ 1.74
NME3-210ENST00000567271 USP17L5A8MUK1 530 aa25.93■■□□□ 1.74
NME3-210ENST00000567271 BTBD19C9JJ37 291 aa25.93■■□□□ 1.74
NME3-210ENST00000567271 SHROOM1Q2M3G4 852 aaPredicted RBP25.93■■□□□ 1.74
NME3-210ENST00000567271 TBC1D2Q9BYX2 928 aa25.93■■□□□ 1.74
NME3-210ENST00000567271 R3HDMLQ9H3Y0 253 aa25.93■■□□□ 1.74
NME3-210ENST00000567271 EPB41L4AQ9HCS5 686 aaPredicted RBP25.93■■□□□ 1.74
NME3-210ENST00000567271 ARPP21Q9UBL0 812 aaPredicted RBP25.93■■□□□ 1.74
NME3-210ENST00000567271 ZBTB21Q9ULJ3 1066 aa25.93■■□□□ 1.74
NME3-210ENST00000567271 A0A0G2JLL6 359 aaPredicted RBP25.92■■□□□ 1.74
NME3-210ENST00000567271 TRIM75PA6NK02 468 aa25.92■■□□□ 1.74
NME3-210ENST00000567271 CERKLQ49MI3 558 aaPredicted RBP25.92■■□□□ 1.74
NME3-210ENST00000567271 SBK1Q52WX2 424 aa25.92■■□□□ 1.74
NME3-210ENST00000567271 PRRT2Q7Z6L0 340 aaPredicted RBP25.92■■□□□ 1.74
NME3-210ENST00000567271 DYNLL2Q96FJ2 89 aa25.92■■□□□ 1.74
NME3-210ENST00000567271 FAM227BQ96M60 508 aa25.92■■□□□ 1.74
NME3-210ENST00000567271 SWAP70Q9UH65 585 aa25.92■■□□□ 1.74
NME3-210ENST00000567271 PHIPQ8WWQ0 1821 aa25.92■■□□□ 1.74
NME3-210ENST00000567271 ATAD5Q96QE3 1844 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 SMIM22K7EJ46 135 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 APPP05067 770 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 SDSP20132 328 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 SPP2Q13103 211 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 TTC22Q5TAA0 569 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 CCDC129Q6ZRS4 1044 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 IFNL3Q8IZI9 196 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 ZNF280CQ8ND82 737 aa25.91■■□□□ 1.74
NME3-210ENST00000567271 ZCCHC17Q9NP64 241 aaKnown RBP25.91■■□□□ 1.74
NME3-210ENST00000567271 GH2P01242 217 aa25.9■■□□□ 1.74
NME3-210ENST00000567271 NMIQ13287 307 aaPredicted RBP25.9■■□□□ 1.74
NME3-210ENST00000567271 MCMDC2Q4G0Z9 681 aa25.9■■□□□ 1.74
NME3-210ENST00000567271 ANKRD23Q86SG2 305 aa25.9■■□□□ 1.74
NME3-210ENST00000567271 SLC44A5Q8NCS7 719 aa25.9■■□□□ 1.74
NME3-210ENST00000567271 WDR18Q9BV38 432 aa25.9■■□□□ 1.74
NME3-210ENST00000567271 AS3MTQ9HBK9 375 aa25.9■■□□□ 1.74
NME3-210ENST00000567271 A0A0D9SFI3 127 aa25.89■■□□□ 1.74
NME3-210ENST00000567271 GSPT1P15170 499 aaKnown RBP25.89■■□□□ 1.74
NME3-210ENST00000567271 TDO2P48775 406 aa25.89■■□□□ 1.74
NME3-210ENST00000567271 CRHR2Q13324 411 aa25.89■■□□□ 1.74
NME3-210ENST00000567271 ABCB5Q2M3G0 1257 aa25.89■■□□□ 1.74
NME3-210ENST00000567271 NOM1Q5C9Z4 860 aaKnown RBP25.89■■□□□ 1.74
NME3-210ENST00000567271 FASTKD5Q7L8L6 764 aaKnown RBP25.89■■□□□ 1.74
NME3-210ENST00000567271 NACAP1Q9BZK3 213 aa25.89■■□□□ 1.74
NME3-210ENST00000567271 GPR25O00155 361 aa25.88■■□□□ 1.73
NME3-210ENST00000567271 GPAT2Q6NUI2 795 aa25.88■■□□□ 1.73
NME3-210ENST00000567271 C16orf86Q6ZW13 317 aa25.88■■□□□ 1.73
NME3-210ENST00000567271 FOXP2O15409 715 aa25.87■■□□□ 1.73
NME3-210ENST00000567271 CDK8P49336 464 aa25.87■■□□□ 1.73
NME3-210ENST00000567271 TAF1CQ15572 869 aaPredicted RBP25.87■■□□□ 1.73
NME3-210ENST00000567271 CABP5Q9NP86 173 aa25.87■■□□□ 1.73
NME3-210ENST00000567271 MINDY4BA8MYZ0 360 aa25.86■■□□□ 1.73
NME3-210ENST00000567271 PDHXO00330 501 aa25.86■■□□□ 1.73
NME3-210ENST00000567271 GADL1Q6ZQY3 521 aa25.86■■□□□ 1.73
NME3-210ENST00000567271 CCDC136Q96JN2 1154 aa25.86■■□□□ 1.73
NME3-210ENST00000567271 ZFYVE28Q9HCC9 887 aa25.86■■□□□ 1.73
NME3-210ENST00000567271 CASP8AP2Q9UKL3 1982 aa25.86■■□□□ 1.73
NME3-210ENST00000567271 HIP1O00291 1037 aa25.85■■□□□ 1.73
NME3-210ENST00000567271 SH3D19Q5HYK7 790 aa25.85■■□□□ 1.73
NME3-210ENST00000567271 VPS53Q5VIR6 699 aa25.85■■□□□ 1.73
NME3-210ENST00000567271 ZNF296Q8WUU4 475 aaPredicted RBP25.85■■□□□ 1.73
NME3-210ENST00000567271 NAPBQ9H115 298 aa25.85■■□□□ 1.73
NME3-210ENST00000567271 DIAPH3Q9NSV4 1193 aa25.85■■□□□ 1.73
NME3-210ENST00000567271 GUCY1A2P33402 732 aa25.84■■□□□ 1.73
NME3-210ENST00000567271 BACE1P56817 501 aa25.84■■□□□ 1.73
NME3-210ENST00000567271 RAB3GAP1Q15042 981 aa25.84■■□□□ 1.73
NME3-210ENST00000567271 ZNF589Q86UQ0 364 aaPredicted RBP25.84■■□□□ 1.73
NME3-210ENST00000567271 PTPRFP10586 1907 aa25.84■■□□□ 1.73
NME3-210ENST00000567271 ROBO3Q96MS0 1386 aa25.83■■□□□ 1.73
NME3-210ENST00000567271 USP17L10C9JJH3 530 aa25.83■■□□□ 1.73
NME3-210ENST00000567271 MPHOSPH10O00566 681 aaKnown RBP25.83■■□□□ 1.73
NME3-210ENST00000567271 HMGCS2P54868 508 aa25.83■■□□□ 1.73
NME3-210ENST00000567271 MTMR2Q13614 643 aa25.83■■□□□ 1.73
NME3-210ENST00000567271 PROCA1Q8NCQ7 364 aaPredicted RBP25.83■■□□□ 1.73
NME3-210ENST00000567271 CCDC17Q96LX7 622 aa25.83■■□□□ 1.73
NME3-210ENST00000567271 SLC45A1Q9Y2W3 748 aa25.83■■□□□ 1.73
NME3-210ENST00000567271 C19orf81C9J6K1 198 aa25.82■■□□□ 1.72
NME3-210ENST00000567271 FKTNO75072 461 aa25.82■■□□□ 1.72
NME3-210ENST00000567271 AKR1B1P15121 316 aa25.82■■□□□ 1.72
NME3-210ENST00000567271 SEPT2Q15019 361 aa25.82■■□□□ 1.72
NME3-210ENST00000567271 CWC27Q6UX04 472 aaKnown RBP25.82■■□□□ 1.72
NME3-210ENST00000567271 TMEM179Q6ZVK1 233 aa25.82■■□□□ 1.72
NME3-210ENST00000567271 AGTPBP1Q9UPW5 1226 aa25.82■■□□□ 1.72
NME3-210ENST00000567271 CCDC171Q6TFL3 1326 aa25.82■■□□□ 1.72
NME3-210ENST00000567271 TLR2O60603 784 aa25.81■■□□□ 1.72
NME3-210ENST00000567271 DGKZQ13574 1117 aa25.81■■□□□ 1.72
NME3-210ENST00000567271 ALX1Q15699 326 aa25.81■■□□□ 1.72
NME3-210ENST00000567271 TREML2Q5T2D2 321 aa25.81■■□□□ 1.72
NME3-210ENST00000567271 STK11IPQ8N1F8 1099 aa25.81■■□□□ 1.72
NME3-210ENST00000567271 HSPD1P10809 573 aaKnown RBP25.8■■□□□ 1.72
NME3-210ENST00000567271 MFAP1P55081 439 aaKnown RBP25.8■■□□□ 1.72
NME3-210ENST00000567271 MKNK2Q9HBH9 465 aa25.8■■□□□ 1.72
NME3-210ENST00000567271 TMOD4Q9NZQ9 345 aa25.8■■□□□ 1.72
NME3-210ENST00000567271 PPARAQ07869 468 aa25.79■■□□□ 1.72
NME3-210ENST00000567271 ERICH6BQ5W0A0 696 aa25.79■■□□□ 1.72
NME3-210ENST00000567271 SKAP1Q86WV1 359 aa25.79■■□□□ 1.72
NME3-210ENST00000567271 ACER1Q8TDN7 264 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms