RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 APPP05067 770 aa19.94■□□□□ 0.78
CLN6-208ENST00000567060 POLR3DP05423 398 aaPredicted RBP19.94■□□□□ 0.78
CLN6-208ENST00000567060 IREB2P48200 963 aaKnown RBP19.94■□□□□ 0.78
CLN6-208ENST00000567060 OTUD7BQ6GQQ9 843 aa19.94■□□□□ 0.78
CLN6-208ENST00000567060 SH3BP5LQ7L8J4 393 aa19.94■□□□□ 0.78
CLN6-208ENST00000567060 ZFPM1Q8IX07 1006 aa19.94■□□□□ 0.78
CLN6-208ENST00000567060 ANKRD13AQ8IZ07 590 aa19.94■□□□□ 0.78
CLN6-208ENST00000567060 IFNL3Q8IZI9 196 aa19.94■□□□□ 0.78
CLN6-208ENST00000567060 ZNF341Q9BYN7 854 aa19.94■□□□□ 0.78
CLN6-208ENST00000567060 RBBP6Q7Z6E9 1792 aaKnown RBP19.93■□□□□ 0.78
CLN6-208ENST00000567060 PRKAB2O43741 272 aa19.93■□□□□ 0.78
CLN6-208ENST00000567060 HSPD1P10809 573 aaKnown RBP19.93■□□□□ 0.78
CLN6-208ENST00000567060 FXR1P51114 621 aaKnown RBP eCLIP19.93■□□□□ 0.78
CLN6-208ENST00000567060 NAPBQ9H115 298 aa19.93■□□□□ 0.78
CLN6-208ENST00000567060 SERPINB13Q9UIV8 391 aa19.93■□□□□ 0.78
CLN6-208ENST00000567060 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
CLN6-208ENST00000567060 TDO2P48775 406 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 C12orf60Q5U649 245 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 ZNF589Q86UQ0 364 aaPredicted RBP19.92■□□□□ 0.78
CLN6-208ENST00000567060 CDAN1Q8IWY9 1227 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 CNKSR2Q8WXI2 1034 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 OPTNQ96CV9 577 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 ZNF333Q96JL9 665 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 TRIM34Q9BYJ4 488 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 ELP3Q9H9T3 547 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 ZNF287Q9HBT7 754 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 GINM1Q9NU53 330 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 SWAP70Q9UH65 585 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 ZNF112Q9UJU3 913 aa19.92■□□□□ 0.78
CLN6-208ENST00000567060 USP17L12C9JPN9 530 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 USP17L21D6R901 530 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 NT5C2P49902 561 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 CTR9Q6PD62 1173 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 CCDC129Q6ZRS4 1044 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.91■□□□□ 0.78
CLN6-208ENST00000567060 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 ESYT1Q9BSJ8 1104 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 CTNNA3Q9UI47 895 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 BAZ2AQ9UIF9 1905 aaKnown RBP19.91■□□□□ 0.78
CLN6-208ENST00000567060 ROBO3Q96MS0 1386 aa19.91■□□□□ 0.78
CLN6-208ENST00000567060 EPB41L2O43491 1005 aaKnown RBP19.9■□□□□ 0.78
CLN6-208ENST00000567060 SLC3A2P08195 630 aaKnown RBP19.9■□□□□ 0.78
CLN6-208ENST00000567060 CRACR2BQ8N4Y2 399 aaPredicted RBP19.9■□□□□ 0.78
CLN6-208ENST00000567060 BRI3BPQ8WY22 251 aa19.9■□□□□ 0.78
CLN6-208ENST00000567060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-208ENST00000567060 EPB41L4AQ9HCS5 686 aaPredicted RBP19.9■□□□□ 0.78
CLN6-208ENST00000567060 SAP30BPQ9UHR5 308 aaKnown RBP19.9■□□□□ 0.78
CLN6-208ENST00000567060 RANBP2P49792 3224 aaKnown RBP19.89■□□□□ 0.78
CLN6-208ENST00000567060 PCP11498 1178 aaKnown RBP19.89■□□□□ 0.77
CLN6-208ENST00000567060 MAP3K9P80192 1104 aa19.89■□□□□ 0.77
CLN6-208ENST00000567060 GABPAQ06546 454 aa19.89■□□□□ 0.77
CLN6-208ENST00000567060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.89■□□□□ 0.77
CLN6-208ENST00000567060 COLQQ9Y215 455 aaPredicted RBP19.89■□□□□ 0.77
CLN6-208ENST00000567060 SIPA1L1O43166 1804 aa19.88■□□□□ 0.77
CLN6-208ENST00000567060 FOXP2O15409 715 aa19.88■□□□□ 0.77
CLN6-208ENST00000567060 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
CLN6-208ENST00000567060 FGAP02671 866 aa19.88■□□□□ 0.77
CLN6-208ENST00000567060 NOL9Q5SY16 702 aaKnown RBP19.88■□□□□ 0.77
CLN6-208ENST00000567060 VPS53Q5VIR6 699 aa19.88■□□□□ 0.77
CLN6-208ENST00000567060 ANAPC4Q9UJX5 808 aa19.88■□□□□ 0.77
CLN6-208ENST00000567060 PTCH2Q9Y6C5 1203 aa19.88■□□□□ 0.77
CLN6-208ENST00000567060 CEP290O15078 2479 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 PLCD1P51178 756 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 TATDN1Q6P1N9 297 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 C16orf86Q6ZW13 317 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 MIGA2Q7L4E1 593 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 TMEM106CQ9BVX2 250 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 TBC1D2Q9BYX2 928 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 CSADQ9Y600 493 aa19.87■□□□□ 0.77
CLN6-208ENST00000567060 U3KPZ7 1027 aaPredicted RBP19.87■□□□□ 0.77
CLN6-208ENST00000567060 PHF20L1A8MW92 1017 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 REC8O95072 547 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 PPARAQ07869 468 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 VGLL4Q14135 290 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 FAM43AQ8N2R8 423 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 CCDC17Q96LX7 622 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 WRNIP1Q96S55 665 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 OTOFQ9HC10 1997 aa19.86■□□□□ 0.77
CLN6-208ENST00000567060 CCL15-CCL14A0A0B4J2E2 113 aa19.85■□□□□ 0.77
CLN6-208ENST00000567060 PDE4BQ07343 736 aa19.85■□□□□ 0.77
CLN6-208ENST00000567060 TAF1CQ15572 869 aaPredicted RBP19.85■□□□□ 0.77
CLN6-208ENST00000567060 CCL15Q16663 113 aa19.85■□□□□ 0.77
CLN6-208ENST00000567060 MAP4K1Q92918 833 aa19.85■□□□□ 0.77
CLN6-208ENST00000567060 IL25Q9H293 177 aa19.85■□□□□ 0.77
CLN6-208ENST00000567060 ZFYVE28Q9HCC9 887 aa19.85■□□□□ 0.77
CLN6-208ENST00000567060 MINDY4BA8MYZ0 360 aa19.84■□□□□ 0.77
CLN6-208ENST00000567060 ASNSP08243 561 aa19.84■□□□□ 0.77
CLN6-208ENST00000567060 CAP2P40123 477 aa19.84■□□□□ 0.77
CLN6-208ENST00000567060 IMMTQ16891 758 aaKnown RBP19.84■□□□□ 0.77
CLN6-208ENST00000567060 SLC9C1Q4G0N8 1177 aa19.84■□□□□ 0.77
CLN6-208ENST00000567060 NBPF11Q86T75 865 aa19.84■□□□□ 0.77
CLN6-208ENST00000567060 SCYL3Q8IZE3 742 aa19.84■□□□□ 0.77
CLN6-208ENST00000567060 RNF41Q9H4P4 317 aaPredicted RBP19.84■□□□□ 0.77
CLN6-208ENST00000567060 DNAJC18Q9H819 358 aa19.84■□□□□ 0.77
CLN6-208ENST00000567060 LAMA4Q16363 1823 aa19.83■□□□□ 0.77
CLN6-208ENST00000567060 MYH8P13535 1937 aa19.83■□□□□ 0.77
CLN6-208ENST00000567060 ZNF213O14771 459 aa19.83■□□□□ 0.77
CLN6-208ENST00000567060 FGRP09769 529 aa19.83■□□□□ 0.77
CLN6-208ENST00000567060 GTF2A2P52657 109 aa19.83■□□□□ 0.77
CLN6-208ENST00000567060 ARHGAP39Q9C0H5 1083 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms