RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 USP5P45974 858 aa17.31■□□□□ 0.36
COMMD4-216ENST00000567023 IRF5Q13568 498 aa17.31■□□□□ 0.36
COMMD4-216ENST00000567023 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
COMMD4-216ENST00000567023 GABRQQ9UN88 632 aa17.31■□□□□ 0.36
COMMD4-216ENST00000567023 SLC34A2O95436 690 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 MTMR2Q13614 643 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 MTFR1Q15390 333 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 SLC9C2Q5TAH2 1124 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 SLAIN1Q8ND83 568 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-216ENST00000567023 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
COMMD4-216ENST00000567023 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 APBB1O00213 710 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 TNPO2O14787 897 aaKnown RBP17.29■□□□□ 0.36
COMMD4-216ENST00000567023 PDE6AP16499 860 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 FLT3LGP49771 235 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 TTC6Q86TZ1 520 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 PXYLP1Q8TE99 480 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 MYH1P12882 1939 aa17.29■□□□□ 0.36
COMMD4-216ENST00000567023 MAGEB6P1A0A0J9YX57 407 aa17.28■□□□□ 0.36
COMMD4-216ENST00000567023 GOLIM4O00461 696 aa17.28■□□□□ 0.36
COMMD4-216ENST00000567023 GDF11O95390 407 aa17.28■□□□□ 0.36
COMMD4-216ENST00000567023 MYCP01106 439 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-216ENST00000567023 ATP5JP18859 108 aa17.28■□□□□ 0.36
COMMD4-216ENST00000567023 SHROOM1Q2M3G4 852 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-216ENST00000567023 NKX2-3Q8TAU0 364 aa17.28■□□□□ 0.36
COMMD4-216ENST00000567023 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
COMMD4-216ENST00000567023 ZNF532Q9HCE3 1301 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 ADCY3O60266 1144 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 GJB1P08034 283 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 GJA8P48165 433 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 PLCD1P51178 756 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 UBXN2AP68543 259 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 COA7Q96BR5 231 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 DNAJC2Q99543 621 aaKnown RBP17.27■□□□□ 0.36
COMMD4-216ENST00000567023 MORF4L1Q9UBU8 362 aa17.27■□□□□ 0.36
COMMD4-216ENST00000567023 GH2P01242 217 aa17.26■□□□□ 0.35
COMMD4-216ENST00000567023 CCL5P13501 91 aa17.26■□□□□ 0.35
COMMD4-216ENST00000567023 GABPAQ06546 454 aa17.26■□□□□ 0.35
COMMD4-216ENST00000567023 CERKLQ49MI3 558 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-216ENST00000567023 HAUS7Q99871 368 aa17.26■□□□□ 0.35
COMMD4-216ENST00000567023 CRNKL1Q9BZJ0 848 aaKnown RBP17.26■□□□□ 0.35
COMMD4-216ENST00000567023 LRRCC1Q9C099 1032 aa17.26■□□□□ 0.35
COMMD4-216ENST00000567023 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
COMMD4-216ENST00000567023 PAG1Q9NWQ8 432 aa17.26■□□□□ 0.35
COMMD4-216ENST00000567023 DOCK3Q8IZD9 2030 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-216ENST00000567023 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 SHISA4Q96DD7 197 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
COMMD4-216ENST00000567023 C12orf42Q96LP6 360 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
COMMD4-216ENST00000567023 RNF208Q9H0X6 261 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 BOLA2Q9H3K6 86 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 BIN2Q9UBW5 565 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-216ENST00000567023 GJD2Q9UKL4 321 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
COMMD4-216ENST00000567023 DDX60LQ5H9U9 1706 aaKnown RBP17.24■□□□□ 0.35
COMMD4-216ENST00000567023 CAPN2P17655 700 aa17.24■□□□□ 0.35
COMMD4-216ENST00000567023 SHMT1P34896 483 aa17.24■□□□□ 0.35
COMMD4-216ENST00000567023 ADD2P35612 726 aa17.24■□□□□ 0.35
COMMD4-216ENST00000567023 HERVK_113P62684 666 aa17.24■□□□□ 0.35
COMMD4-216ENST00000567023 DCP1AQ9NPI6 582 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-216ENST00000567023 POLR3DP05423 398 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-216ENST00000567023 ELNP15502 786 aa17.23■□□□□ 0.35
COMMD4-216ENST00000567023 ABCB5Q2M3G0 1257 aa17.23■□□□□ 0.35
COMMD4-216ENST00000567023 UBE2Q1Q7Z7E8 422 aa17.23■□□□□ 0.35
COMMD4-216ENST00000567023 LCORLQ8N3X6 602 aa17.23■□□□□ 0.35
COMMD4-216ENST00000567023 GTF3C2Q8WUA4 911 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-216ENST00000567023 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
COMMD4-216ENST00000567023 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.35
COMMD4-216ENST00000567023 KIAA1683Q9H0B3 1180 aa17.23■□□□□ 0.35
COMMD4-216ENST00000567023 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
COMMD4-216ENST00000567023 INHAP05111 366 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 USP14P54578 494 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 GPRC5AQ8NFJ5 357 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 UNC93B1Q9H1C4 597 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 DCTPP1Q9H773 170 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 TXNRD2Q9NNW7 524 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 CABP5Q9NP86 173 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 ATP8A2Q9NTI2 1148 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
COMMD4-216ENST00000567023 SGPL1O95470 568 aa17.21■□□□□ 0.35
COMMD4-216ENST00000567023 GUCY1A2P33402 732 aa17.21■□□□□ 0.35
COMMD4-216ENST00000567023 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
COMMD4-216ENST00000567023 POTEEQ6S8J3 1075 aa17.21■□□□□ 0.35
COMMD4-216ENST00000567023 U2AF1L4Q8WU68 220 aaKnown RBP17.21■□□□□ 0.35
COMMD4-216ENST00000567023 BCL11AQ9H165 835 aa17.21■□□□□ 0.35
COMMD4-216ENST00000567023 PAK6Q9NQU5 681 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-216ENST00000567023 USP17L15C9J2P7 530 aa17.2■□□□□ 0.34
COMMD4-216ENST00000567023 USP17L13C9JLJ4 530 aa17.2■□□□□ 0.34
COMMD4-216ENST00000567023 USP17L11C9JVI0 530 aa17.2■□□□□ 0.34
COMMD4-216ENST00000567023 USP17L18D6R9N7 530 aa17.2■□□□□ 0.34
COMMD4-216ENST00000567023 USP17L22D6RA61 530 aa17.2■□□□□ 0.34
COMMD4-216ENST00000567023 USP17L17D6RBQ6 530 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms