RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 CABP5Q9NP86 173 aa12.27□□□□□ -0.45
HMGN2P40-201ENST00000566875 PAG1Q9NWQ8 432 aa12.27□□□□□ -0.45
HMGN2P40-201ENST00000566875 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.27□□□□□ -0.45
HMGN2P40-201ENST00000566875 BIN2Q9UBW5 565 aaPredicted RBP12.27□□□□□ -0.45
HMGN2P40-201ENST00000566875 ZNF532Q9HCE3 1301 aa12.27□□□□□ -0.45
HMGN2P40-201ENST00000566875 OTOFQ9HC10 1997 aa12.27□□□□□ -0.45
HMGN2P40-201ENST00000566875 ZSCAN25Q6NSZ9 544 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 SH3TC2Q8TF17 1288 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 COA7Q96BR5 231 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 ZBTB21Q9ULJ3 1066 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 MYPNQ86TC9 1320 aa12.26□□□□□ -0.45
HMGN2P40-201ENST00000566875 TCRBV5S4A2TA0A5A2 114 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 TNPO2O14787 897 aaKnown RBP12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 GDF11O95390 407 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 GH2P01242 217 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 PLCD1P51178 756 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 UBXN2AP68543 259 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 IRX3P78415 501 aaPredicted RBP12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 JAG1P78504 1218 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 MTMR2Q13614 643 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 FAM110CQ1W6H9 321 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L2Q6R6M4 530 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 DNAJC18Q9H819 358 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 ECHDC1Q9NTX5 307 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 LAMB1P07942 1786 aa12.25□□□□□ -0.45
HMGN2P40-201ENST00000566875 SMARCA5O60264 1052 aaPredicted RBP12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 CAPN2P17655 700 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 ADD2P35612 726 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 FLT3LGP49771 235 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 PRKCZQ05513 592 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 IRF5Q13568 498 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 UBE3CQ15386 1083 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 ABCB5Q2M3G0 1257 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 PXYLP1Q8TE99 480 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 DDRGK1Q96HY6 314 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
HMGN2P40-201ENST00000566875 CENPFP49454 3210 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 ADCY3O60266 1144 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP14P54578 494 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 RAB3GAP1Q15042 981 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 PRPF38BQ5VTL8 546 aaKnown RBP12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 AMOTL1Q8IY63 956 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 GPRC5AQ8NFJ5 357 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 GTF3C2Q8WUA4 911 aaPredicted RBP12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 DCP1AQ9NPI6 582 aaPredicted RBP12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 EMILIN3Q9NT22 766 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 GABRQQ9UN88 632 aa12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 TNRC18O15417 2968 aaPredicted RBP12.23□□□□□ -0.45
HMGN2P40-201ENST00000566875 HTTP42858 3142 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L15C9J2P7 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L13C9JLJ4 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L11C9JVI0 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L18D6R9N7 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L22D6RA61 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L17D6RBQ6 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L19D6RCP7 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L20D6RJB6 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 GJB1P08034 283 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 SHMT1P34896 483 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 GABPAQ06546 454 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L24Q0WX57 530 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 FEZ1Q99689 392 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 RNF208Q9H0X6 261 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 ARMT1Q9H993 441 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 MORF4L1Q9UBU8 362 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
HMGN2P40-201ENST00000566875 MBD4O95243 580 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 CCL5P13501 91 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 HERVK_113P62684 666 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 MTFR1Q15390 333 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 LRRFIP1Q32MZ4 808 aaKnown RBP12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 LCORLQ8N3X6 602 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 SDR42E1Q8WUS8 393 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 C12orf42Q96LP6 360 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 CCDC17Q96LX7 622 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 RBPJLQ9UBG7 517 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 GJD2Q9UKL4 321 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
HMGN2P40-201ENST00000566875 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 USP17L21D6R901 530 aa12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 MPHOSPH10O00566 681 aaKnown RBP12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 PRKAB2O43741 272 aa12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 GJA8P48165 433 aa12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 SHROOM1Q2M3G4 852 aaPredicted RBP12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
HMGN2P40-201ENST00000566875 HOXC10Q9NYD6 342 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms