RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SLC12A7Q9Y666 1083 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 PNPLA7Q6ZV29 1317 aa19.28■□□□□ 0.68
CMTM3-213ENST00000566756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-213ENST00000566756 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-213ENST00000566756 SEMA3EO15041 775 aa19.27■□□□□ 0.68
CMTM3-213ENST00000566756 RANBP6O60518 1105 aaKnown RBP19.27■□□□□ 0.68
CMTM3-213ENST00000566756 ARMCX5Q6P1M9 558 aa19.27■□□□□ 0.68
CMTM3-213ENST00000566756 TMC6Q7Z403 805 aa19.27■□□□□ 0.68
CMTM3-213ENST00000566756 COL23A1Q86Y22 540 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-213ENST00000566756 TMTC2Q8N394 836 aa19.27■□□□□ 0.68
CMTM3-213ENST00000566756 HOOK1Q9UJC3 728 aaKnown RBP19.27■□□□□ 0.68
CMTM3-213ENST00000566756 DENND2AQ9ULE3 1009 aa19.27■□□□□ 0.68
CMTM3-213ENST00000566756 MORC2Q9Y6X9 1032 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-213ENST00000566756 AKNAD1Q5T1N1 836 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 E4F1Q66K89 784 aaPredicted RBP19.26■□□□□ 0.67
CMTM3-213ENST00000566756 FBXO33Q7Z6M2 555 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 STAG1Q8WVM7 1258 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 PHKBQ93100 1093 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 FAM84BQ96KN1 310 aaPredicted RBP19.26■□□□□ 0.67
CMTM3-213ENST00000566756 HSD3B7Q9H2F3 369 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 EPB41L4AQ9HCS5 686 aaPredicted RBP19.26■□□□□ 0.67
CMTM3-213ENST00000566756 OGFRQ9NZT2 677 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 PDS5AQ29RF7 1337 aaKnown RBP19.26■□□□□ 0.67
CMTM3-213ENST00000566756 BIN1O00499 593 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 NKX2-3Q8TAU0 364 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 ZSWIM5Q9P217 1185 aa19.26■□□□□ 0.67
CMTM3-213ENST00000566756 IFIT3O14879 490 aaKnown RBP19.25■□□□□ 0.67
CMTM3-213ENST00000566756 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-213ENST00000566756 GYG1P46976 350 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 SART3Q15020 963 aaKnown RBP19.25■□□□□ 0.67
CMTM3-213ENST00000566756 SAFBQ15424 915 aaKnown RBP eCLIP19.25■□□□□ 0.67
CMTM3-213ENST00000566756 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 KRBA2Q6ZNG9 492 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 NOSTRINQ8IVI9 506 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 KRI1Q8N9T8 703 aaKnown RBP19.25■□□□□ 0.67
CMTM3-213ENST00000566756 ZNF592Q92610 1267 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 RPGRQ92834 1020 aaKnown RBP19.25■□□□□ 0.67
CMTM3-213ENST00000566756 FBXW7Q969H0 707 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 NACAP1Q9BZK3 213 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 FOXP1Q9H334 677 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-213ENST00000566756 L2HGDHQ9H9P8 463 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 ANKRD31Q8N7Z5 1873 aa19.25■□□□□ 0.67
CMTM3-213ENST00000566756 CCDC196A0A1B0GTZ2 297 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 MMP1P03956 469 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 PPP2R5BQ15173 497 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 GTPBP4Q9BZE4 634 aaKnown RBP19.24■□□□□ 0.67
CMTM3-213ENST00000566756 SENP2Q9HC62 589 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 LEMD3Q9Y2U8 911 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 QSER1Q2KHR3 1735 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 GSG1L2A8MUP6 293 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 MBD4O95243 580 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 RILPL1Q5EBL4 403 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 MFSD6Q6ZSS7 791 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 TRIM22Q8IYM9 498 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 MAGEB6Q8N7X4 407 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 ZNF579Q8NAF0 562 aaKnown RBP19.24■□□□□ 0.67
CMTM3-213ENST00000566756 RBM17Q96I25 401 aaKnown RBP19.24■□□□□ 0.67
CMTM3-213ENST00000566756 PPP1R13BQ96KQ4 1090 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 KCNH3Q9ULD8 1083 aa19.24■□□□□ 0.67
CMTM3-213ENST00000566756 IRS2Q9Y4H2 1338 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 WTIPA6NIX2 430 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 SLU7O95391 586 aaKnown RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 ZSCAN20P17040 1043 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 DMTNQ08495 405 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 METTL16Q86W50 562 aaKnown RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 CRAMP1Q96RY5 1269 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 ARID3AQ99856 593 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 RNF41Q9H4P4 317 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 TRMT1Q9NXH9 659 aaKnown RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 RXRAP19793 462 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 LMOD1P29536 600 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 CBX1P83916 185 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 NT5DC1Q5TFE4 455 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 CNNM3Q8NE01 707 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 ZNF397Q8NF99 534 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-213ENST00000566756 SLC26A6Q9BXS9 759 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 TMX1Q9H3N1 280 aa19.23■□□□□ 0.67
CMTM3-213ENST00000566756 BBOX1O75936 387 aa19.22■□□□□ 0.67
CMTM3-213ENST00000566756 DEXIO95424 95 aa19.22■□□□□ 0.67
CMTM3-213ENST00000566756 PTPREP23469 700 aa19.22■□□□□ 0.67
CMTM3-213ENST00000566756 UBASH3AP57075 661 aa19.22■□□□□ 0.67
CMTM3-213ENST00000566756 MDM2Q00987 491 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-213ENST00000566756 C15orf52Q6ZUT6 534 aaKnown RBP19.22■□□□□ 0.67
CMTM3-213ENST00000566756 ZNF215Q9UL58 517 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-213ENST00000566756 XDHP47989 1333 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 HIBADHP31937 336 aaKnown RBP19.21■□□□□ 0.67
CMTM3-213ENST00000566756 PNOCQ13519 176 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 RTN1Q16799 776 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 VSTM4Q8IW00 320 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 TRIML1Q8N9V2 468 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 DACH1Q9UI36 760 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
CMTM3-213ENST00000566756 PRDM4Q9UKN5 801 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 COL1A1P02452 1464 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-213ENST00000566756 ERICH2A1L162 156 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 LRRC37AA6NMS7 1700 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 IGSF3O75054 1194 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 WTAPQ15007 396 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 LONRF3Q496Y0 759 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms