RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 SIRT2Q8IXJ6 389 aa18.49■□□□□ 0.55
SMPD3-208ENST00000566723 CLASRPQ8N2M8 674 aaKnown RBP18.49■□□□□ 0.55
SMPD3-208ENST00000566723 ZBTB21Q9ULJ3 1066 aa18.49■□□□□ 0.55
SMPD3-208ENST00000566723 APBB1O00213 710 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 GDF11O95390 407 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 GCLCP48506 637 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-208ENST00000566723 FLT3LGP49771 235 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 BACE1P56817 501 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 UBXN2AP68543 259 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 JAG1P78504 1218 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 TTF1Q15361 905 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-208ENST00000566723 SHROOM1Q2M3G4 852 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-208ENST00000566723 SHISA4Q96DD7 197 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 ASCC2Q9H1I8 757 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-208ENST00000566723 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
SMPD3-208ENST00000566723 BIN2Q9UBW5 565 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-208ENST00000566723 PLXNB2O15031 1838 aa18.48■□□□□ 0.55
SMPD3-208ENST00000566723 CCL5P13501 91 aa18.47■□□□□ 0.55
SMPD3-208ENST00000566723 IRF5Q13568 498 aa18.47■□□□□ 0.55
SMPD3-208ENST00000566723 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMPD3-208ENST00000566723 TMOD4Q9NZQ9 345 aa18.47■□□□□ 0.55
SMPD3-208ENST00000566723 ADCY3O60266 1144 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 RAB11FIP3O75154 756 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 IFIT2P09913 472 aaKnown RBP18.46■□□□□ 0.55
SMPD3-208ENST00000566723 NKX2-3Q8TAU0 364 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 PXYLP1Q8TE99 480 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 COA7Q96BR5 231 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 GCC1Q96CN9 775 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 RIOK1Q9BRS2 568 aaKnown RBP18.46■□□□□ 0.55
SMPD3-208ENST00000566723 EHD4Q9H223 541 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 SERPINB13Q9UIV8 391 aa18.46■□□□□ 0.55
SMPD3-208ENST00000566723 BAZ2AQ9UIF9 1905 aaKnown RBP18.46■□□□□ 0.55
SMPD3-208ENST00000566723 C19orf81C9J6K1 198 aa18.45■□□□□ 0.54
SMPD3-208ENST00000566723 USP17L10C9JJH3 530 aa18.45■□□□□ 0.54
SMPD3-208ENST00000566723 GJB1P08034 283 aa18.45■□□□□ 0.54
SMPD3-208ENST00000566723 PDE6AP16499 860 aa18.45■□□□□ 0.54
SMPD3-208ENST00000566723 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-208ENST00000566723 IRX3P78415 501 aaPredicted RBP18.45■□□□□ 0.54
SMPD3-208ENST00000566723 DNAJC2Q99543 621 aaKnown RBP18.45■□□□□ 0.54
SMPD3-208ENST00000566723 RNF208Q9H0X6 261 aa18.45■□□□□ 0.54
SMPD3-208ENST00000566723 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
SMPD3-208ENST00000566723 GOLIM4O00461 696 aa18.44■□□□□ 0.54
SMPD3-208ENST00000566723 ELNP15502 786 aa18.44■□□□□ 0.54
SMPD3-208ENST00000566723 GJA8P48165 433 aa18.44■□□□□ 0.54
SMPD3-208ENST00000566723 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
SMPD3-208ENST00000566723 TTC6Q86TZ1 520 aa18.44■□□□□ 0.54
SMPD3-208ENST00000566723 MORF4L1Q9UBU8 362 aa18.44■□□□□ 0.54
SMPD3-208ENST00000566723 GH2P01242 217 aa18.43■□□□□ 0.54
SMPD3-208ENST00000566723 INHAP05111 366 aa18.43■□□□□ 0.54
SMPD3-208ENST00000566723 TATDN1Q6P1N9 297 aa18.43■□□□□ 0.54
SMPD3-208ENST00000566723 UNC93B1Q9H1C4 597 aa18.43■□□□□ 0.54
SMPD3-208ENST00000566723 HERVK_113P62684 666 aa18.42■□□□□ 0.54
SMPD3-208ENST00000566723 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
SMPD3-208ENST00000566723 CRNKL1Q9BZJ0 848 aaKnown RBP18.42■□□□□ 0.54
SMPD3-208ENST00000566723 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
SMPD3-208ENST00000566723 TAOK2Q9UL54 1235 aa18.42■□□□□ 0.54
SMPD3-208ENST00000566723 ZNF532Q9HCE3 1301 aa18.42■□□□□ 0.54
SMPD3-208ENST00000566723 TCRBV5S4A2TA0A5A2 114 aa18.41■□□□□ 0.54
SMPD3-208ENST00000566723 CERKLQ49MI3 558 aaPredicted RBP18.41■□□□□ 0.54
SMPD3-208ENST00000566723 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
SMPD3-208ENST00000566723 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
SMPD3-208ENST00000566723 U2AF1L4Q8WU68 220 aaKnown RBP18.41■□□□□ 0.54
SMPD3-208ENST00000566723 P2RX7Q99572 595 aaKnown RBP18.41■□□□□ 0.54
SMPD3-208ENST00000566723 FEZ1Q99689 392 aa18.41■□□□□ 0.54
SMPD3-208ENST00000566723 SHMT1P34896 483 aa18.4■□□□□ 0.54
SMPD3-208ENST00000566723 PLCD1P51178 756 aa18.4■□□□□ 0.54
SMPD3-208ENST00000566723 ABCB5Q2M3G0 1257 aa18.4■□□□□ 0.54
SMPD3-208ENST00000566723 UBE2Q1Q7Z7E8 422 aa18.4■□□□□ 0.54
SMPD3-208ENST00000566723 GTF3C2Q8WUA4 911 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-208ENST00000566723 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
SMPD3-208ENST00000566723 C12orf42Q96LP6 360 aa18.4■□□□□ 0.54
SMPD3-208ENST00000566723 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
SMPD3-208ENST00000566723 PAG1Q9NWQ8 432 aa18.4■□□□□ 0.54
SMPD3-208ENST00000566723 POLR3DP05423 398 aaPredicted RBP18.39■□□□□ 0.53
SMPD3-208ENST00000566723 ATP5JP18859 108 aa18.39■□□□□ 0.53
SMPD3-208ENST00000566723 GABPAQ06546 454 aa18.39■□□□□ 0.53
SMPD3-208ENST00000566723 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
SMPD3-208ENST00000566723 LCORLQ8N3X6 602 aa18.39■□□□□ 0.53
SMPD3-208ENST00000566723 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.53
SMPD3-208ENST00000566723 TXNRD2Q9NNW7 524 aa18.39■□□□□ 0.53
SMPD3-208ENST00000566723 FARP2O94887 1054 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-208ENST00000566723 SGPL1O95470 568 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 HMGCRP04035 888 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 USP14P54578 494 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 GPRC5AQ8NFJ5 357 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 SDR42E1Q8WUS8 393 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 HAUS7Q99871 368 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 LRRCC1Q9C099 1032 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 CABP5Q9NP86 173 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 DCP1AQ9NPI6 582 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-208ENST00000566723 PAK6Q9NQU5 681 aaPredicted RBP18.38■□□□□ 0.53
SMPD3-208ENST00000566723 MCM9Q9NXL9 1143 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 GJD2Q9UKL4 321 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 ALPK3Q96L96 1907 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 TRIOBPQ9H2D6 2365 aa18.38■□□□□ 0.53
SMPD3-208ENST00000566723 ADD2P35612 726 aa18.37■□□□□ 0.53
SMPD3-208ENST00000566723 ERVK-9P63128 1117 aa18.37■□□□□ 0.53
SMPD3-208ENST00000566723 ERVK-24P63145 666 aa18.37■□□□□ 0.53
SMPD3-208ENST00000566723 ZYXQ15942 572 aaKnown RBP18.37■□□□□ 0.53
SMPD3-208ENST00000566723 HABP4Q5JVS0 413 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms