RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.2
CDH1-209ENST00000566510 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
CDH1-209ENST00000566510 CPLX3Q8WVH0 158 aa16.27■□□□□ 0.2
CDH1-209ENST00000566510 WDR24Q96S15 920 aa16.27■□□□□ 0.2
CDH1-209ENST00000566510 CEP131Q9UPN4 1083 aa16.27■□□□□ 0.2
CDH1-209ENST00000566510 STX17P56962 302 aa16.27■□□□□ 0.19
CDH1-209ENST00000566510 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.19
CDH1-209ENST00000566510 TC2NQ8N9U0 490 aa16.27■□□□□ 0.19
CDH1-209ENST00000566510 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 MORC3Q14149 939 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 NUTM2AQ8IVF1 878 aaPredicted RBP16.26■□□□□ 0.19
CDH1-209ENST00000566510 STAG1Q8WVM7 1258 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 SRRTQ9BXP5 876 aaKnown RBP16.26■□□□□ 0.19
CDH1-209ENST00000566510 VPS54Q9P1Q0 977 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 SLAIN2Q9P270 581 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 FAM205CA6NFA0 338 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 STX10O60499 249 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 CASP1P29466 404 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 FCHSD1Q86WN1 690 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 ENOX1Q8TC92 643 aaKnown RBP16.26■□□□□ 0.19
CDH1-209ENST00000566510 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 SRPRBQ9Y5M8 271 aaKnown RBP16.26■□□□□ 0.19
CDH1-209ENST00000566510 FHOD1Q9Y613 1164 aa16.26■□□□□ 0.19
CDH1-209ENST00000566510 NUP98P52948 1817 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 PRDM1O75626 825 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
CDH1-209ENST00000566510 GNAT2P19087 354 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 EPSTI1Q96J88 318 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 EFCAB8A8MWE9 144 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 SEC31AO94979 1220 aaKnown RBP16.25■□□□□ 0.19
CDH1-209ENST00000566510 ZNF18P17022 549 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 CYP7A1P22680 504 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 PPARAQ07869 468 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 TBX2Q13207 712 aaPredicted RBP16.25■□□□□ 0.19
CDH1-209ENST00000566510 TEX35Q5T0J7 233 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 SUSD4Q5VX71 490 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 KANK3Q6NY19 840 aa16.25■□□□□ 0.19
CDH1-209ENST00000566510 NOL10Q9BSC4 688 aaKnown RBP16.25■□□□□ 0.19
CDH1-209ENST00000566510 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
CDH1-209ENST00000566510 BAZ2BQ9UIF8 2168 aaKnown RBP16.24■□□□□ 0.19
CDH1-209ENST00000566510 SMIM22K7EJ46 135 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 ACTN4O43707 911 aaKnown RBP16.24■□□□□ 0.19
CDH1-209ENST00000566510 TADA3O75528 432 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 SARSP49591 514 aaKnown RBP16.24■□□□□ 0.19
CDH1-209ENST00000566510 MTF1Q14872 753 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 MYH6P13533 1939 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 TNKSO95271 1327 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 XBP1P17861 261 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 NT5DC1Q5TFE4 455 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 MED15Q96RN5 788 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 LZTFL1Q9NQ48 299 aa16.24■□□□□ 0.19
CDH1-209ENST00000566510 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
CDH1-209ENST00000566510 GOLGA6L9A6NEM1 432 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 TRIM75PA6NK02 468 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
CDH1-209ENST00000566510 PLCD1P51178 756 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 SMYD4Q8IYR2 804 aaPredicted RBP16.23■□□□□ 0.19
CDH1-209ENST00000566510 ZNF579Q8NAF0 562 aaKnown RBP16.23■□□□□ 0.19
CDH1-209ENST00000566510 CCDC12Q8WUD4 166 aaPredicted RBP16.23■□□□□ 0.19
CDH1-209ENST00000566510 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 TEX33O43247 280 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
CDH1-209ENST00000566510 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 STAMQ92783 540 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 ZSWIM4Q9H7M6 989 aa16.23■□□□□ 0.19
CDH1-209ENST00000566510 SOWAHDA6NJG2 315 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 POLR3GO15318 223 aaPredicted RBP16.22■□□□□ 0.19
CDH1-209ENST00000566510 COBLO75128 1261 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 PPP2R3AQ06190 1150 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 PPFIBP1Q86W92 1011 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 TRIML1Q8N9V2 468 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 ESR2Q92731 530 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 IRX2Q9BZI1 471 aaPredicted RBP16.22■□□□□ 0.19
CDH1-209ENST00000566510 V9GY48 417 aaPredicted RBP16.22■□□□□ 0.19
CDH1-209ENST00000566510 ITGB4P16144 1822 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 AKR1B15C9JRZ8 316 aaPredicted RBP16.22■□□□□ 0.19
CDH1-209ENST00000566510 NR1I3Q14994 352 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 EARS2Q5JPH6 523 aaKnown RBP16.22■□□□□ 0.19
CDH1-209ENST00000566510 ADGRA1Q86SQ6 560 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 A0A087X0B3 334 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 CYP2D7A0A087X1C5 515 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 TPM1P09493 284 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
CDH1-209ENST00000566510 ZNF174Q15697 407 aa16.22■□□□□ 0.19
CDH1-209ENST00000566510 LRP6O75581 1613 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 KRT2P35908 639 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 SYMPKQ92797 1274 aaKnown RBP16.21■□□□□ 0.19
CDH1-209ENST00000566510 PNPLA7Q6ZV29 1317 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 SYNRGQ9UMZ2 1314 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
CDH1-209ENST00000566510 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.18
CDH1-209ENST00000566510 CCDC175P0C221 793 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms