RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 BAZ2AQ9UIF9 1905 aaKnown RBP15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 CYP2D7A0A087X1C5 515 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 GSG1L2A8MUP6 293 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 USP17L12C9JPN9 530 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 USP17L21D6R901 530 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 PDE4AP27815 886 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 ANKRD23Q86SG2 305 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 ZNF296Q8WUU4 475 aaPredicted RBP15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 TBC1D2Q9BYX2 928 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 GINM1Q9NU53 330 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 ZBTB21Q9ULJ3 1066 aa15.47■□□□□ 0.07
CNEP1R1-208ENST00000566482 TRIM6-TRIM34B2RNG4 842 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 GH2P01242 217 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 SPP2Q13103 211 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 CERKLQ49MI3 558 aaPredicted RBP15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 C12orf60Q5U649 245 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 GPAT2Q6NUI2 795 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 CTR9Q6PD62 1173 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 GADL1Q6ZQY3 521 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 AMOTL1Q8IY63 956 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 ZNF280CQ8ND82 737 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 RILPL2Q969X0 211 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 DYNLL2Q96FJ2 89 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 PTPRFP10586 1907 aa15.46■□□□□ 0.07
CNEP1R1-208ENST00000566482 SMIM22K7EJ46 135 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 PDHXO00330 501 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 FKTNO75072 461 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 GNAT2P19087 354 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 GIMAP6Q6P9H5 292 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 FASTKD5Q7L8L6 764 aaKnown RBP15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 SLC44A5Q8NCS7 719 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 WDR18Q9BV38 432 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 AS3MTQ9HBK9 375 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 ZFYVE28Q9HCC9 887 aa15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 EPB41L4AQ9HCS5 686 aaPredicted RBP15.45■□□□□ 0.06
CNEP1R1-208ENST00000566482 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
CNEP1R1-208ENST00000566482 CCDC129Q6ZRS4 1044 aa15.44■□□□□ 0.06
CNEP1R1-208ENST00000566482 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
CNEP1R1-208ENST00000566482 SWAP70Q9UH65 585 aa15.44■□□□□ 0.06
CNEP1R1-208ENST00000566482 PATL2C9JE40 543 aaKnown RBP15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 APPP05067 770 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 HMGCS2P54868 508 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 DGKZQ13574 1117 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 MTMR2Q13614 643 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 SBK1Q52WX2 424 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 C16orf86Q6ZW13 317 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 TICAM2Q86XR7 235 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 FAM227BQ96M60 508 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 HELLSQ9NRZ9 838 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 TAOK2Q9UL54 1235 aa15.43■□□□□ 0.06
CNEP1R1-208ENST00000566482 LOC285556D6RIA3 1793 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 A0A0D9SFI3 127 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 TLR2O60603 784 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 GUCY1A2P33402 732 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 TDO2P48775 406 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 CDK8P49336 464 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 RAB3GAP1Q15042 981 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 SH3D19Q5HYK7 790 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 CTU1Q7Z7A3 348 aaKnown RBP15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 CABP5Q9NP86 173 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 AGTPBP1Q9UPW5 1226 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 ADGRA2Q96PE1 1338 aa15.42■□□□□ 0.06
CNEP1R1-208ENST00000566482 MINDY4BA8MYZ0 360 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 USP17L10C9JJH3 530 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 MPHOSPH10O00566 681 aaKnown RBP15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 BACE1P56817 501 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 SP3Q02447 781 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 SEPT2Q15019 361 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 TREML2Q5T2D2 321 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 PARK7Q99497 189 aaKnown RBP15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 NACAP1Q9BZK3 213 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 MCOLN1Q9GZU1 580 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 SLC45A1Q9Y2W3 748 aa15.41■□□□□ 0.06
CNEP1R1-208ENST00000566482 ROBO3Q96MS0 1386 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 FOXP2O15409 715 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 CYP2C8P10632 490 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 AKR1B1P15121 316 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 SDSP20132 328 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 MCMDC2Q4G0Z9 681 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 TTC22Q5TAA0 569 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 CD99L2Q8TCZ2 262 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 ERO1AQ96HE7 468 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 NAPBQ9H115 298 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 TMOD4Q9NZQ9 345 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 CPA4Q9UI42 421 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 MYH8P13535 1937 aa15.4■□□□□ 0.06
CNEP1R1-208ENST00000566482 C19orf81C9J6K1 198 aa15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 GSPT1P15170 499 aaKnown RBP15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 C17orf99Q6UX52 265 aa15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 TMEM179Q6ZVK1 233 aa15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 ZNF589Q86UQ0 364 aaPredicted RBP15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 ACER1Q8TDN7 264 aa15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 CCDC17Q96LX7 622 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms