RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 THAP3Q8WTV1 239 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-209ENST00000566240 ACSF2Q96CM8 615 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-209ENST00000566240 GPATCH3Q96I76 525 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 SPOCK3Q9BQ16 436 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 PHAXQ9H814 394 aaKnown RBP7.25□□□□□ -1.25
CNOT1-209ENST00000566240 PICK1Q9NRD5 415 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 TMEM260Q9NX78 707 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 PFDN2Q9UHV9 154 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 KDM2BQ8NHM5 1336 aa7.25□□□□□ -1.25
CNOT1-209ENST00000566240 DIAPH1O60610 1272 aaKnown RBP7.24□□□□□ -1.25
CNOT1-209ENST00000566240 ID3Q02535 119 aa7.24□□□□□ -1.25
CNOT1-209ENST00000566240 SQSTM1Q13501 440 aa7.24□□□□□ -1.25
CNOT1-209ENST00000566240 C2orf27AQ580R0 203 aa7.24□□□□□ -1.25
CNOT1-209ENST00000566240 EEPD1Q7L9B9 569 aa7.24□□□□□ -1.25
CNOT1-209ENST00000566240 JMYQ8N9B5 988 aa7.24□□□□□ -1.25
CNOT1-209ENST00000566240 ZNF669Q96BR6 464 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-209ENST00000566240 SLKQ9H2G2 1235 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-209ENST00000566240 ZMYM5Q9UJ78 669 aa7.24□□□□□ -1.25
CNOT1-209ENST00000566240 LEMD3Q9Y2U8 911 aa7.24□□□□□ -1.25
CNOT1-209ENST00000566240 FAM86C2PA6NEL3 165 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 FANCGO15287 622 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 PROCP04070 461 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 RAG1P15918 1043 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 SSRP1Q08945 709 aaKnown RBP7.23□□□□□ -1.25
CNOT1-209ENST00000566240 DUOXA2Q1HG44 320 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 ZBTB37Q5TC79 503 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 PODNQ7Z5L7 613 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 MCATQ8IVS2 390 aaKnown RBP7.23□□□□□ -1.25
CNOT1-209ENST00000566240 NEDD1Q8NHV4 660 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 UBASH3BQ8TF42 649 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 PPP1R9AQ9ULJ8 1098 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 PCDHB10Q9UN67 800 aa7.23□□□□□ -1.25
CNOT1-209ENST00000566240 TMPRSS2O15393 492 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 ADAM23O75077 832 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 YARSP54577 528 aaKnown RBP7.22□□□□□ -1.25
CNOT1-209ENST00000566240 AKAP4Q5JQC9 854 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 XP32Q5T750 250 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 KIAA1211LQ6NV74 962 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 FILIP1Q7Z7B0 1213 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 KIAA0907Q7Z7F0 614 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-209ENST00000566240 FBXO11Q86XK2 927 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 BEND7Q8N7W2 519 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-209ENST00000566240 FAM13CQ8NE31 585 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 ZNF507Q8TCN5 953 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 TMPRSS13Q9BYE2 586 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 IFT57Q9NWB7 429 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 CRIM1Q9NZV1 1036 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 TJP2Q9UDY2 1190 aa7.22□□□□□ -1.25
CNOT1-209ENST00000566240 MEGF11A6BM72 1044 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 DLL1O00548 723 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 PPP1R12AO14974 1030 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-209ENST00000566240 IBSPP21815 317 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-209ENST00000566240 SLC7A5Q01650 507 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 GNPTABQ3T906 1256 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 SLC6A19Q695T7 634 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 HID1Q8IV36 788 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 SLFN12Q8IYM2 578 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 RNF214Q8ND24 703 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 ZCRB1Q8TBF4 217 aaKnown RBP7.21□□□□□ -1.26
CNOT1-209ENST00000566240 KLHL6Q8WZ60 621 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 TMEM87BQ96K49 555 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 FANCD2OSQ96PS1 177 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 RUSC1Q9BVN2 902 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 SPC25Q9HBM1 224 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 DISC1Q9NRI5 854 aa7.21□□□□□ -1.26
CNOT1-209ENST00000566240 ZNF214Q9UL59 606 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-209ENST00000566240 hCG_2014768A0A024R1R8 64 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 DNAJC6O75061 913 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 POLR2BP30876 1174 aaKnown RBP7.2□□□□□ -1.26
CNOT1-209ENST00000566240 NTF4P34130 210 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 CCNFP41002 786 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 DGKGP49619 791 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 GYS2P54840 703 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 IGBP1P78318 339 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 NUTM2GQ5VZR2 741 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 MRPL41Q8IXM3 137 aaKnown RBP7.2□□□□□ -1.26
CNOT1-209ENST00000566240 PHACTR4Q8IZ21 702 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 DHRS1Q96LJ7 313 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 BRINP2Q9C0B6 783 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 PRKAB1Q9Y478 270 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 PTCH2Q9Y6C5 1203 aa7.2□□□□□ -1.26
CNOT1-209ENST00000566240 A0A0A0MRY4 1105 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 SUSD5O60279 629 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 WISP1O95388 367 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 HOXB4P17483 251 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-209ENST00000566240 RAC1P63000 192 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 CDC37L1Q7L3B6 337 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 FMR1NBQ8N0W7 255 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-209ENST00000566240 KIF2CQ99661 725 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 FEZ1Q99689 392 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 SPATA9Q9BWV2 254 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 EPN3Q9H201 632 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 ATXN3LQ9H3M9 355 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 TMX1Q9H3N1 280 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 FBRSQ9HAH7 460 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 CYP4F12Q9HCS2 524 aa7.19□□□□□ -1.26
CNOT1-209ENST00000566240 NOP58Q9Y2X3 529 aaKnown RBP7.19□□□□□ -1.26
CNOT1-209ENST00000566240 RGS13O14921 159 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms