RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 STOX1Q6ZVD7 989 aa17.5■□□□□ 0.39
SPG7-213ENST00000566221 RALYLQ86SE5 291 aaKnown RBP17.5■□□□□ 0.39
SPG7-213ENST00000566221 NCOA7Q8NI08 942 aa17.5■□□□□ 0.39
SPG7-213ENST00000566221 IL17RAQ96F46 866 aa17.5■□□□□ 0.39
SPG7-213ENST00000566221 TACC3Q9Y6A5 838 aa17.5■□□□□ 0.39
SPG7-213ENST00000566221 PLIN4Q96Q06 1357 aa17.5■□□□□ 0.39
SPG7-213ENST00000566221 PRDM1O75626 825 aa17.49■□□□□ 0.39
SPG7-213ENST00000566221 SLURP2P0DP57 97 aa17.49■□□□□ 0.39
SPG7-213ENST00000566221 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
SPG7-213ENST00000566221 ESR2Q92731 530 aa17.49■□□□□ 0.39
SPG7-213ENST00000566221 CCDC17Q96LX7 622 aa17.49■□□□□ 0.39
SPG7-213ENST00000566221 B4E1Z4 1266 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 RANBP6O60518 1105 aaKnown RBP17.48■□□□□ 0.39
SPG7-213ENST00000566221 HMGB1P09429 215 aaKnown RBP17.48■□□□□ 0.39
SPG7-213ENST00000566221 PSMA5P28066 241 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 IREB2P48200 963 aaKnown RBP17.48■□□□□ 0.39
SPG7-213ENST00000566221 FKBP1BP68106 108 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 CERKLQ49MI3 558 aaPredicted RBP17.48■□□□□ 0.39
SPG7-213ENST00000566221 ZNF444Q8N0Y2 327 aaPredicted RBP17.48■□□□□ 0.39
SPG7-213ENST00000566221 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
SPG7-213ENST00000566221 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 PCDH10Q9P2E7 1040 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 ZNF112Q9UJU3 913 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 PTPRFP10586 1907 aa17.48■□□□□ 0.39
SPG7-213ENST00000566221 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 TSPY2A6NKD2 308 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 CELF2O95319 508 aaKnown RBP17.47■□□□□ 0.39
SPG7-213ENST00000566221 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
SPG7-213ENST00000566221 ADCK5Q3MIX3 580 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 ARMC9Q7Z3E5 817 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 MB21D2Q8IYB1 491 aaPredicted RBP17.47■□□□□ 0.39
SPG7-213ENST00000566221 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 TM6SF1Q9BZW5 370 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 GINM1Q9NU53 330 aa17.47■□□□□ 0.39
SPG7-213ENST00000566221 CTNND1O60716 968 aaKnown RBP17.46■□□□□ 0.39
SPG7-213ENST00000566221 KDM4AO75164 1064 aa17.46■□□□□ 0.39
SPG7-213ENST00000566221 USP2O75604 605 aaPredicted RBP17.46■□□□□ 0.39
SPG7-213ENST00000566221 TSPY3P0CV98 308 aa17.46■□□□□ 0.39
SPG7-213ENST00000566221 TSPY8P0CW00 308 aa17.46■□□□□ 0.39
SPG7-213ENST00000566221 CASTP20810 708 aaKnown RBP17.46■□□□□ 0.39
SPG7-213ENST00000566221 CAP2P40123 477 aa17.46■□□□□ 0.39
SPG7-213ENST00000566221 FMR1Q06787 632 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPG7-213ENST00000566221 PRKG1Q13976 671 aa17.46■□□□□ 0.39
SPG7-213ENST00000566221 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
SPG7-213ENST00000566221 ABCB5Q2M3G0 1257 aa17.46■□□□□ 0.39
SPG7-213ENST00000566221 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.46■□□□□ 0.39
SPG7-213ENST00000566221 GBA2Q9HCG7 927 aaPredicted RBP17.46■□□□□ 0.39
SPG7-213ENST00000566221 ANGEL1Q9UNK9 670 aaKnown RBP17.46■□□□□ 0.39
SPG7-213ENST00000566221 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
SPG7-213ENST00000566221 GDF11O95390 407 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 AKR1B1P15121 316 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 MCM5P33992 734 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 TFAP4Q01664 338 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 NOL9Q5SY16 702 aaKnown RBP17.45■□□□□ 0.38
SPG7-213ENST00000566221 BLOC1S2Q6QNY1 142 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 TMEM179Q6ZVK1 233 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 CABP5Q9NP86 173 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 ZBTB21Q9ULJ3 1066 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 FZD1Q9UP38 647 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 WDR19Q8NEZ3 1342 aa17.45■□□□□ 0.38
SPG7-213ENST00000566221 UNCXA6NJT0 531 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 FOXN1O15353 648 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 ASNSP08243 561 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 INPP5BP32019 993 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
SPG7-213ENST00000566221 FAM47AQ5JRC9 791 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 IQCA1Q86XH1 822 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 ANKRD13AQ8IZ07 590 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 SCYL3Q8IZE3 742 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 C2orf69Q8N8R5 385 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 ZSWIM6Q9HCJ5 1215 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 CSADQ9Y600 493 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
SPG7-213ENST00000566221 GH2P01242 217 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 RPS6KB1P23443 525 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 SART3Q15020 963 aaKnown RBP17.43■□□□□ 0.38
SPG7-213ENST00000566221 CCDC178Q5BJE1 867 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 DHX32Q7L7V1 743 aaKnown RBP17.43■□□□□ 0.38
SPG7-213ENST00000566221 KIF2CQ99661 725 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 UBAC1Q9BSL1 405 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 MTA3Q9BTC8 594 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 TCP11L1Q9NUJ3 509 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 ZSWIM5Q9P217 1185 aa17.43■□□□□ 0.38
SPG7-213ENST00000566221 PRC1O43663 620 aa17.42■□□□□ 0.38
SPG7-213ENST00000566221 ANTXR2P58335 489 aa17.42■□□□□ 0.38
SPG7-213ENST00000566221 VGLL4Q14135 290 aa17.42■□□□□ 0.38
SPG7-213ENST00000566221 CST9Q5W186 159 aa17.42■□□□□ 0.38
SPG7-213ENST00000566221 NKX2-3Q8TAU0 364 aa17.42■□□□□ 0.38
SPG7-213ENST00000566221 ZKSCAN4Q969J2 545 aaPredicted RBP17.42■□□□□ 0.38
SPG7-213ENST00000566221 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
SPG7-213ENST00000566221 PRDM10Q9NQV6 1147 aa17.42■□□□□ 0.38
SPG7-213ENST00000566221 PICK1Q9NRD5 415 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms