RNA–Protein interactions for RNA: ENST00000566039.5

RPL4-210, Transcript of ribosomal protein L4, human

TSL 2

Gene RPL4, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL4-210	ENST00000566039	METTL16	Q86W50	562 aa	Known RBP	10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	ANKLE1	Q8NAG6	615 aa		10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	SPATA5	Q8NB90	893 aa		10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	AS3MT	Q9HBK9	375 aa		10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	HMG20B	Q9P0W2	317 aa		10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	ABCF2	Q9UG63	623 aa		10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	PA2G4	Q9UQ80	394 aa	Known RBP	10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	SIPA1L1	O43166	1804 aa		10.83	□□□□□ -0.68
RPL4-210	ENST00000566039	DDTL	A6NHG4	134 aa	Predicted RBP	10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	BAG3	O95817	575 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	CCL5	P13501	91 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	TRIM27	P14373	513 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	TFCP2	Q12800	502 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	ZNF280C	Q8ND82	737 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	COA7	Q96BR5	231 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	WDR18	Q9BV38	432 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	DDX4	Q9NQI0	724 aa	Known RBP	10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	PAK6	Q9NQU5	681 aa	Predicted RBP	10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	NR2E3	Q9Y5X4	410 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	CDK5RAP2	Q96SN8	1893 aa		10.82	□□□□□ -0.68
RPL4-210	ENST00000566039	RANBP2	P49792	3224 aa	Known RBP	10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	TNPO2	O14787	897 aa	Known RBP	10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	ASNS	P08243	561 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	CYP2C8	P10632	490 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	CAP2	P40123	477 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	PPP4C	P60510	307 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	ZFPM1	Q8IX07	1006 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	TRMT44	Q8IYL2	757 aa	Known RBP	10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	ZNF384	Q8TF68	577 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	U2AF1L4	Q8WU68	220 aa	Known RBP	10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	NOL10	Q9BSC4	688 aa	Known RBP	10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	CRISPLD2	Q9H0B8	497 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	PRO3102	Q9H379	93 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	PI4KB	Q9UBF8	816 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	MORF4L1	Q9UBU8	362 aa		10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	DDX60L	Q5H9U9	1706 aa	Known RBP	10.81	□□□□□ -0.68
RPL4-210	ENST00000566039	USP17L5	A8MUK1	530 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	ADCY3	O60266	1144 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	FARP2	O94887	1054 aa	Predicted RBP	10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	SGPL1	O95470	568 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	HOXA7	P31268	230 aa	Predicted RBP	10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	FLT3LG	P49771	235 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	TIMM10	P62072	90 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.8	□□□□□ -0.68	4e-9	■□□□□ 8.9
RPL4-210	ENST00000566039	MTFR1	Q15390	333 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	GORAB	Q5T7V8	394 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	GADL1	Q6ZQY3	521 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	SSH3	Q8TE77	659 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	SOCS4	Q8WXH5	440 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	RNF208	Q9H0X6	261 aa		10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
RPL4-210	ENST00000566039	TRIM75P	A6NK02	468 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	C19orf81	C9J6K1	198 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	HMGCR	P04035	888 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	INHA	P05111	366 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	MCAM	P43121	646 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	PICALM	Q13492	652 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	CCDC158	Q5M9N0	1113 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	TEX11	Q8IYF3	940 aa		10.79	□□□□□ -0.68
RPL4-210	ENST00000566039	NOP58	Q9Y2X3	529 aa	Known RBP	10.79	□□□□□ -0.68
RPL4-210	ENST00000566039		H0YGN5	161 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	XRCC5	P13010	732 aa	Known RBP	10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	BACE1	P56817	501 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	TNNI3K	Q59H18	835 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	ZKSCAN2	Q63HK3	967 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	NEUROD6	Q96NK8	337 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	EHD4	Q9H223	541 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	ZSWIM6	Q9HCJ5	1215 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	LRP2BP	Q9P2M1	347 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	FPGT-TNNI3K	V9GXZ4	949 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	ZNF236	Q9UL36	1845 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	FLT1	P17948	1338 aa		10.78	□□□□□ -0.68
RPL4-210	ENST00000566039	PNMA6E	A0A0J9YXQ4	647 aa		10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	ZBTB7B	O15156	539 aa	Predicted RBP	10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	HLA-DOA	P06340	250 aa		10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	NAA16	Q6N069	864 aa	Predicted RBP	10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	GPR153	Q6NV75	609 aa		10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	C12orf42	Q96LP6	360 aa		10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	RAI14	Q9P0K7	980 aa		10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	BIN2	Q9UBW5	565 aa	Predicted RBP	10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	GABRQ	Q9UN88	632 aa		10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	PLXNB2	O15031	1838 aa		10.77	□□□□□ -0.69
RPL4-210	ENST00000566039	MAPK4	P31152	587 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	IRX3	P78415	501 aa	Predicted RBP	10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	SPP2	Q13103	211 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	TTC39A	Q5SRH9	613 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	TREML2	Q5T2D2	321 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	MAP3K21	Q5TCX8	1036 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	ERC1	Q8IUD2	1116 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	ANKRD13C	Q8N6S4	541 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	UNC93B1	Q9H1C4	597 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	TMOD4	Q9NZQ9	345 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	RPTOR	Q8N122	1335 aa		10.76	□□□□□ -0.69
RPL4-210	ENST00000566039	BMP8B	P34820	402 aa		10.75	□□□□□ -0.69
RPL4-210	ENST00000566039	HMGCS2	P54868	508 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms