RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLC44A5Q8NCS7 719 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 HHIPL1Q96JK4 782 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 ZNF408Q9H9D4 720 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 OTOFQ9HC10 1997 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 INPP5BP32019 993 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 PRKG1Q13976 671 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 BECN1Q14457 450 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 TBC1D10CQ8IV04 446 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 ZKSCAN4Q969J2 545 aaPredicted RBP14.95□□□□□ -0.02
SF3B3-206ENST00000565990 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 TRIM34Q9BYJ4 488 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 RNF41Q9H4P4 317 aaPredicted RBP14.95□□□□□ -0.02
SF3B3-206ENST00000565990 MKNK2Q9HBH9 465 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
SF3B3-206ENST00000565990 GREB1LQ9C091 1923 aaPredicted RBP14.95□□□□□ -0.02
SF3B3-206ENST00000565990 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 C1QTNF8P60827 252 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 SCYL3Q8IZE3 742 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 ZNF444Q8N0Y2 327 aaPredicted RBP14.94□□□□□ -0.02
SF3B3-206ENST00000565990 WRNIP1Q96S55 665 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.94□□□□□ -0.02
SF3B3-206ENST00000565990 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
SF3B3-206ENST00000565990 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 TAF6LQ9Y6J9 622 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 DOCK1Q14185 1865 aa14.94□□□□□ -0.02
SF3B3-206ENST00000565990 E7EWF7 191 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 PTPRAP18433 802 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 GUCY1A2P33402 732 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 NOVP48745 357 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 VGLL4Q14135 290 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 TTLL12Q14166 644 aaPredicted RBP14.93□□□□□ -0.02
SF3B3-206ENST00000565990 ABCB5Q2M3G0 1257 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 STOX1Q6ZVD7 989 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 NEDD1Q8NHV4 660 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 NKX2-3Q8TAU0 364 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 CNNM2Q9H8M5 875 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 TCP11L1Q9NUJ3 509 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 SNCAIPQ9Y6H5 919 aa14.93□□□□□ -0.02
SF3B3-206ENST00000565990 IGKV6D-41A0A0C4DH26 115 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 PRDM1O75626 825 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 ASNSP08243 561 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 AKR1B1P15121 316 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 TFAP4Q01664 338 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 SIAH1Q8IUQ4 282 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 STK11IPQ8N1F8 1099 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 SLC10A4Q96EP9 437 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 KRT23Q9C075 422 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 ZSWIM5Q9P217 1185 aa14.92□□□□□ -0.02
SF3B3-206ENST00000565990 GH2P01242 217 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 ZKSCAN1P17029 563 aaPredicted RBP14.91□□□□□ -0.02
SF3B3-206ENST00000565990 HUNKP57058 714 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 PPATQ06203 517 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 RGMBQ6NW40 437 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 TMEM179Q6ZVK1 233 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 NCOA7Q8NI08 942 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 ESR2Q92731 530 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 CLMNQ96JQ2 1002 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 WDR18Q9BV38 432 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 IL17RBQ9NRM6 502 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 SNX14Q9Y5W7 946 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 CSADQ9Y600 493 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 NEDD4P46934 1319 aa14.91□□□□□ -0.02
SF3B3-206ENST00000565990 PLIN4Q96Q06 1357 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 GDF11O95390 407 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 ANAPC15P60006 121 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 KRT32Q14532 448 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 SHROOM1Q2M3G4 852 aaPredicted RBP14.9□□□□□ -0.02
SF3B3-206ENST00000565990 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 FAM47AQ5JRC9 791 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 ERO1BQ86YB8 467 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 MKL1Q969V6 931 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 MTA3Q9BTC8 594 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 TBC1D2Q9BYX2 928 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 KANSL2Q9H9L4 492 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 ZBTB21Q9ULJ3 1066 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 AFG3L2Q9Y4W6 797 aa14.9□□□□□ -0.02
SF3B3-206ENST00000565990 SPDYE5A6NIY4 337 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 RASSF10A6NK89 507 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 USP17L5A8MUK1 530 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 B4E1Z4 1266 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 RANBP6O60518 1105 aaKnown RBP14.89□□□□□ -0.03
SF3B3-206ENST00000565990 RBM25P49756 843 aaKnown RBP14.89□□□□□ -0.03
SF3B3-206ENST00000565990 TRDNQ13061 729 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 SEPT2Q15019 361 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 DEFB115Q30KQ5 88 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 MB21D2Q8IYB1 491 aaPredicted RBP14.89□□□□□ -0.03
SF3B3-206ENST00000565990 ANKS1AQ92625 1134 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 CCDC102AQ96A19 550 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 TTC14Q96N46 770 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 TM6SF1Q9BZW5 370 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 PICK1Q9NRD5 415 aa14.89□□□□□ -0.03
SF3B3-206ENST00000565990 TSPY2A6NKD2 308 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 KDM4AO75164 1064 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 TSPY3P0CV98 308 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 TSPY8P0CW00 308 aa14.88□□□□□ -0.03
SF3B3-206ENST00000565990 HSPA6P17066 643 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms