RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 SCAF8Q9UPN6 1271 aaKnown RBP16.1■□□□□ 0.17
GDPD3-203ENST00000565704 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
GDPD3-203ENST00000565704 TFAP4Q01664 338 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
GDPD3-203ENST00000565704 PNMA8AQ86V59 439 aaPredicted RBP16.09■□□□□ 0.17
GDPD3-203ENST00000565704 CCDC17Q96LX7 622 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 LY9Q9HBG7 655 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 MKNK2Q9HBH9 465 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 TPCN1Q9ULQ1 816 aa16.09■□□□□ 0.17
GDPD3-203ENST00000565704 POLR2AP24928 1970 aaKnown RBP16.09■□□□□ 0.17
GDPD3-203ENST00000565704 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
GDPD3-203ENST00000565704 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
GDPD3-203ENST00000565704 JAG1P78504 1218 aa16.08■□□□□ 0.16
GDPD3-203ENST00000565704 ANKRD1Q15327 319 aa16.08■□□□□ 0.16
GDPD3-203ENST00000565704 NBPF12Q5TAG4 269 aaPredicted RBP16.08■□□□□ 0.16
GDPD3-203ENST00000565704 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.16
GDPD3-203ENST00000565704 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.16
GDPD3-203ENST00000565704 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
GDPD3-203ENST00000565704 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.16
GDPD3-203ENST00000565704 ANGEL1Q9UNK9 670 aaKnown RBP16.08■□□□□ 0.16
GDPD3-203ENST00000565704 LIMCH1Q9UPQ0 1083 aa16.08■□□□□ 0.16
GDPD3-203ENST00000565704 GREB1LQ9C091 1923 aaPredicted RBP16.07■□□□□ 0.16
GDPD3-203ENST00000565704 FAM196BA6NMK8 535 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 AKR1B1P15121 316 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 GUCY1A2P33402 732 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 CUL4AQ13619 759 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 ME3Q16798 604 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 DGKHQ86XP1 1220 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 ENAHQ8N8S7 591 aaPredicted RBP16.07■□□□□ 0.16
GDPD3-203ENST00000565704 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
GDPD3-203ENST00000565704 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 RRAGCQ9HB90 399 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
GDPD3-203ENST00000565704 SSC5DA1L4H1 1573 aa16.06■□□□□ 0.16
GDPD3-203ENST00000565704 K7ELQ4 463 aaPredicted RBP16.06■□□□□ 0.16
GDPD3-203ENST00000565704 NMT2O60551 498 aa16.06■□□□□ 0.16
GDPD3-203ENST00000565704 ST3GAL1Q11201 340 aa16.06■□□□□ 0.16
GDPD3-203ENST00000565704 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
GDPD3-203ENST00000565704 SIAH1Q8IUQ4 282 aa16.06■□□□□ 0.16
GDPD3-203ENST00000565704 TMTC2Q8N394 836 aa16.06■□□□□ 0.16
GDPD3-203ENST00000565704 BRF1Q92994 677 aa16.06■□□□□ 0.16
GDPD3-203ENST00000565704 DCPSQ96C86 337 aaKnown RBP16.06■□□□□ 0.16
GDPD3-203ENST00000565704 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
GDPD3-203ENST00000565704 LARP6Q9BRS8 491 aaKnown RBP16.06■□□□□ 0.16
GDPD3-203ENST00000565704 TNKSO95271 1327 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 TSPY2A6NKD2 308 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
GDPD3-203ENST00000565704 LARGE1O95461 756 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 POTEIP0CG38 1075 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 POTEJP0CG39 1038 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 PDIA3P30101 505 aaKnown RBP16.05■□□□□ 0.16
GDPD3-203ENST00000565704 SHROOM1Q2M3G4 852 aaPredicted RBP16.05■□□□□ 0.16
GDPD3-203ENST00000565704 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 TMEM67Q5HYA8 995 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 DLK2Q6UY11 383 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
GDPD3-203ENST00000565704 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
GDPD3-203ENST00000565704 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.05■□□□□ 0.16
GDPD3-203ENST00000565704 TOMM22Q9NS69 142 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 MTMR4Q9NYA4 1195 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
GDPD3-203ENST00000565704 PFKFB2O60825 505 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 TSPY3P0CV98 308 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 TSPY8P0CW00 308 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 RCAN1P53805 252 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 APOBRQ0VD83 1088 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 PRAMEF18Q5VWM3 479 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 KRT26Q7Z3Y9 468 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 HSCBQ8IWL3 235 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 MKL1Q969V6 931 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 CEP95Q96GE4 821 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 NMRK2Q9NPI5 230 aa16.04■□□□□ 0.16
GDPD3-203ENST00000565704 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
GDPD3-203ENST00000565704 NID2Q14112 1375 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 ADM5C9JUS6 153 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 CAP2P40123 477 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 TROAPQ12815 778 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 BECN1Q14457 450 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 WTAPQ15007 396 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
GDPD3-203ENST00000565704 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 USP48Q86UV5 1035 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 HOOK2Q96ED9 719 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 UBAC1Q9BSL1 405 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
GDPD3-203ENST00000565704 GINM1Q9NU53 330 aa16.03■□□□□ 0.16
GDPD3-203ENST00000565704 USP2O75604 605 aaPredicted RBP16.02■□□□□ 0.16
GDPD3-203ENST00000565704 ABCB5Q2M3G0 1257 aa16.02■□□□□ 0.16
GDPD3-203ENST00000565704 APOA5Q6Q788 366 aa16.02■□□□□ 0.16
GDPD3-203ENST00000565704 TMEM179Q6ZVK1 233 aa16.02■□□□□ 0.16
GDPD3-203ENST00000565704 CDC37L1Q7L3B6 337 aa16.02■□□□□ 0.16
GDPD3-203ENST00000565704 KLRG1Q96E93 195 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms