RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 BACE1P56817 501 aa23.04■■□□□ 1.28
SPSB3-207ENST00000565550 MTMR2Q13614 643 aa23.04■■□□□ 1.28
SPSB3-207ENST00000565550 SHROOM1Q2M3G4 852 aaPredicted RBP23.04■■□□□ 1.28
SPSB3-207ENST00000565550 MIGA1Q8NAN2 632 aa23.04■■□□□ 1.28
SPSB3-207ENST00000565550 U2AF1L4Q8WU68 220 aaKnown RBP23.04■■□□□ 1.28
SPSB3-207ENST00000565550 MGAMO43451 1857 aa23.04■■□□□ 1.28
SPSB3-207ENST00000565550 APBB1O00213 710 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 GDF11O95390 407 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 UBE2Q1Q7Z7E8 422 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 AACSQ86V21 672 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 MAGEB6Q8N7X4 407 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 DPF3Q92784 378 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 CHMP4BQ9H444 224 aaKnown RBP23.03■■□□□ 1.28
SPSB3-207ENST00000565550 ANTXR1Q9H6X2 564 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 TMOD4Q9NZQ9 345 aa23.03■■□□□ 1.28
SPSB3-207ENST00000565550 SGPL1O95470 568 aa23.02■■□□□ 1.28
SPSB3-207ENST00000565550 HLA-DOAP06340 250 aa23.02■■□□□ 1.28
SPSB3-207ENST00000565550 ERC1Q8IUD2 1116 aa23.02■■□□□ 1.28
SPSB3-207ENST00000565550 COLQQ9Y215 455 aaPredicted RBP23.02■■□□□ 1.28
SPSB3-207ENST00000565550 PCDHB15Q9Y5E8 787 aa23.02■■□□□ 1.28
SPSB3-207ENST00000565550 MAST2Q6P0Q8 1798 aa23.01■■□□□ 1.27
SPSB3-207ENST00000565550 GINM1Q9NU53 330 aa23.01■■□□□ 1.27
SPSB3-207ENST00000565550 ZBTB21Q9ULJ3 1066 aa23.01■■□□□ 1.27
SPSB3-207ENST00000565550 SIPA1L1O43166 1804 aa23.01■■□□□ 1.27
SPSB3-207ENST00000565550 C19orf81C9J6K1 198 aa23■■□□□ 1.27
SPSB3-207ENST00000565550 USP17L10C9JJH3 530 aa23■■□□□ 1.27
SPSB3-207ENST00000565550 HOXA7P31268 230 aaPredicted RBP23■■□□□ 1.27
SPSB3-207ENST00000565550 USP5P45974 858 aa23■■□□□ 1.27
SPSB3-207ENST00000565550 IRX6P78412 446 aaPredicted RBP23■■□□□ 1.27
SPSB3-207ENST00000565550 IRX3P78415 501 aaPredicted RBP23■■□□□ 1.27
SPSB3-207ENST00000565550 MAP3K12Q12852 859 aa23■■□□□ 1.27
SPSB3-207ENST00000565550 P2RX7Q99572 595 aaKnown RBP23■■□□□ 1.27
SPSB3-207ENST00000565550 BCL11AQ9H165 835 aa23■■□□□ 1.27
SPSB3-207ENST00000565550 IL1RAPL2Q9NP60 686 aa23■■□□□ 1.27
SPSB3-207ENST00000565550 ATAD5Q96QE3 1844 aa23■■□□□ 1.27
SPSB3-207ENST00000565550 LOC285556D6RIA3 1793 aa22.99■■□□□ 1.27
SPSB3-207ENST00000565550 HSP90AB4PQ58FF6 505 aa22.99■■□□□ 1.27
SPSB3-207ENST00000565550 CERS3Q8IU89 383 aa22.99■■□□□ 1.27
SPSB3-207ENST00000565550 DEFB118Q96PH6 123 aa22.99■■□□□ 1.27
SPSB3-207ENST00000565550 MORF4L1Q9UBU8 362 aa22.99■■□□□ 1.27
SPSB3-207ENST00000565550 GJD2Q9UKL4 321 aa22.99■■□□□ 1.27
SPSB3-207ENST00000565550 HMMRO75330 724 aa22.98■■□□□ 1.27
SPSB3-207ENST00000565550 FARP2O94887 1054 aaPredicted RBP22.98■■□□□ 1.27
SPSB3-207ENST00000565550 TFRCP02786 760 aaKnown RBP22.98■■□□□ 1.27
SPSB3-207ENST00000565550 EXOC6Q8TAG9 804 aa22.98■■□□□ 1.27
SPSB3-207ENST00000565550 RHPN1Q8TCX5 695 aa22.98■■□□□ 1.27
SPSB3-207ENST00000565550 HTATIP2Q9BUP3 242 aa22.98■■□□□ 1.27
SPSB3-207ENST00000565550 PEX10O60683 326 aa22.97■■□□□ 1.27
SPSB3-207ENST00000565550 GH2P01242 217 aa22.97■■□□□ 1.27
SPSB3-207ENST00000565550 PAK6Q9NQU5 681 aaPredicted RBP22.97■■□□□ 1.27
SPSB3-207ENST00000565550 DOCK3Q8IZD9 2030 aa22.97■■□□□ 1.27
SPSB3-207ENST00000565550 HERVK_113P62684 666 aa22.96■■□□□ 1.27
SPSB3-207ENST00000565550 TATDN1Q6P1N9 297 aa22.96■■□□□ 1.27
SPSB3-207ENST00000565550 TXNRD2Q9NNW7 524 aa22.96■■□□□ 1.27
SPSB3-207ENST00000565550 EMILIN3Q9NT22 766 aa22.96■■□□□ 1.27
SPSB3-207ENST00000565550 CDK5RAP2Q96SN8 1893 aa22.96■■□□□ 1.27
SPSB3-207ENST00000565550 FXR1P51114 621 aaKnown RBP eCLIP22.95■■□□□ 1.26
SPSB3-207ENST00000565550 TMED8Q6PL24 325 aaPredicted RBP22.95■■□□□ 1.26
SPSB3-207ENST00000565550 TTC6Q86TZ1 520 aa22.95■■□□□ 1.26
SPSB3-207ENST00000565550 GPRC5AQ8NFJ5 357 aa22.95■■□□□ 1.26
SPSB3-207ENST00000565550 SERPINB13Q9UIV8 391 aa22.95■■□□□ 1.26
SPSB3-207ENST00000565550 FOCADQ5VW36 1801 aa22.94■■□□□ 1.26
SPSB3-207ENST00000565550 CAPN2P17655 700 aa22.94■■□□□ 1.26
SPSB3-207ENST00000565550 TTF1Q15361 905 aaPredicted RBP22.94■■□□□ 1.26
SPSB3-207ENST00000565550 USP17L2Q6R6M4 530 aa22.94■■□□□ 1.26
SPSB3-207ENST00000565550 CHRDL2Q6WN34 429 aa22.94■■□□□ 1.26
SPSB3-207ENST00000565550 CLASRPQ8N2M8 674 aaKnown RBP22.94■■□□□ 1.26
SPSB3-207ENST00000565550 RIOK1Q9BRS2 568 aaKnown RBP22.94■■□□□ 1.26
SPSB3-207ENST00000565550 CRISPLD2Q9H0B8 497 aa22.94■■□□□ 1.26
SPSB3-207ENST00000565550 EHD4Q9H223 541 aa22.94■■□□□ 1.26
SPSB3-207ENST00000565550 RBPJLQ9UBG7 517 aa22.94■■□□□ 1.26
SPSB3-207ENST00000565550 MAGEB6P1A0A0J9YX57 407 aa22.93■■□□□ 1.26
SPSB3-207ENST00000565550 SMARCA5O60264 1052 aaPredicted RBP22.93■■□□□ 1.26
SPSB3-207ENST00000565550 HMGCRP04035 888 aa22.93■■□□□ 1.26
SPSB3-207ENST00000565550 Q3C1V9 767 aa22.93■■□□□ 1.26
SPSB3-207ENST00000565550 KIF1BPQ96EK5 621 aa22.93■■□□□ 1.26
SPSB3-207ENST00000565550 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.93■■□□□ 1.268e-12■■■■■ 36
SPSB3-207ENST00000565550 CYP2B6P20813 491 aa22.92■■□□□ 1.26
SPSB3-207ENST00000565550 PLCD1P51178 756 aa22.92■■□□□ 1.26
SPSB3-207ENST00000565550 TRIM32Q13049 653 aa22.92■■□□□ 1.26
SPSB3-207ENST00000565550 RAB3GAP1Q15042 981 aa22.92■■□□□ 1.26
SPSB3-207ENST00000565550 ZYXQ15942 572 aaKnown RBP22.92■■□□□ 1.26
SPSB3-207ENST00000565550 CERKLQ49MI3 558 aaPredicted RBP22.92■■□□□ 1.26
SPSB3-207ENST00000565550 SLC9C2Q5TAH2 1124 aa22.92■■□□□ 1.26
SPSB3-207ENST00000565550 IFIT2P09913 472 aaKnown RBP22.91■■□□□ 1.26
SPSB3-207ENST00000565550 PDE6AP16499 860 aa22.91■■□□□ 1.26
SPSB3-207ENST00000565550 ABCB5Q2M3G0 1257 aa22.91■■□□□ 1.26
SPSB3-207ENST00000565550 POTEEQ6S8J3 1075 aa22.91■■□□□ 1.26
SPSB3-207ENST00000565550 DNAJC2Q99543 621 aaKnown RBP22.91■■□□□ 1.26
SPSB3-207ENST00000565550 PAGR1Q9BTK6 254 aa22.91■■□□□ 1.26
SPSB3-207ENST00000565550 NR2E3Q9Y5X4 410 aa22.91■■□□□ 1.26
SPSB3-207ENST00000565550 CEP290O15078 2479 aa22.9■■□□□ 1.26
SPSB3-207ENST00000565550 RPTORQ8N122 1335 aa22.9■■□□□ 1.26
SPSB3-207ENST00000565550 GOLIM4O00461 696 aa22.9■■□□□ 1.26
SPSB3-207ENST00000565550 POLR3DP05423 398 aaPredicted RBP22.9■■□□□ 1.26
SPSB3-207ENST00000565550 ERVK-9P63128 1117 aa22.9■■□□□ 1.26
SPSB3-207ENST00000565550 ERVK-24P63145 666 aa22.9■■□□□ 1.26
SPSB3-207ENST00000565550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.9■■□□□ 1.26
SPSB3-207ENST00000565550 TRIB2Q92519 343 aa22.9■■□□□ 1.26
SPSB3-207ENST00000565550 PAWRQ96IZ0 340 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms