RNA–Protein interactions for RNA: ENST00000565351.5

KIFC3-220, Transcript of kinesin family member C3, humanhuman

TSL 1 (best)

Gene KIFC3, Length 297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-220ENST00000565351 GPC2Q8N158 579 aa14.33□□□□□ -0.12
KIFC3-220ENST00000565351 NSUN7Q8NE18 718 aaKnown RBP14.33□□□□□ -0.12
KIFC3-220ENST00000565351 FAM151AQ8WW52 585 aa14.33□□□□□ -0.12
KIFC3-220ENST00000565351 SENP2Q9HC62 589 aa14.33□□□□□ -0.12
KIFC3-220ENST00000565351 MYOZ2Q9NPC6 264 aa14.33□□□□□ -0.12
KIFC3-220ENST00000565351 ZNF70Q9UC06 446 aaPredicted RBP14.33□□□□□ -0.12
KIFC3-220ENST00000565351 ZDHHC9Q9Y397 364 aa14.33□□□□□ -0.12
KIFC3-220ENST00000565351 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
KIFC3-220ENST00000565351 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 CCDC69A6NI79 296 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 TSPY2A6NKD2 308 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 GOLGA8BA8MQT2 603 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 WNT10BO00744 389 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 CALM1P0DP23 149 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 CALM2P0DP24 149 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 CALM3P0DP25 149 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 YBX3P16989 372 aaKnown RBP eCLIP14.32□□□□□ -0.12
KIFC3-220ENST00000565351 TFAP4Q01664 338 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 MAP3K10Q02779 954 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 TROAPQ12815 778 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 STK3Q13188 491 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 PICALMQ13492 652 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 NTRK3Q16288 839 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 TATDN1Q6P1N9 297 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 SH3BP5LQ7L8J4 393 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 CCDC17Q96LX7 622 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 IL17RBQ9NRM6 502 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 TMOD2Q9NZR1 351 aa14.32□□□□□ -0.12
KIFC3-220ENST00000565351 GREB1LQ9C091 1923 aaPredicted RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 IGKV6D-41A0A0C4DH26 115 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 CCDC196A0A1B0GTZ2 297 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 DDTLA6NHG4 134 aaPredicted RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 MYO1BO43795 1136 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 DDAH1O94760 285 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 SYT1P21579 422 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 SHMT1P34896 483 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 GMPSP49915 693 aaPredicted RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 IFIT1BQ5T764 474 aaKnown RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 SYNE3Q6ZMZ3 975 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 FAM217BQ9NTX9 383 aaPredicted RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 PGAP2Q9UHJ9 254 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 HERC5Q9UII4 1024 aaKnown RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 KIF3AQ9Y496 699 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 ZC3H4Q9UPT8 1303 aaKnown RBP14.31□□□□□ -0.12
KIFC3-220ENST00000565351 CNTNAP1P78357 1384 aa14.31□□□□□ -0.12
KIFC3-220ENST00000565351 TBC1D12O60347 775 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 CDKL5O76039 1030 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 IFNAR1P17181 557 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.12
KIFC3-220ENST00000565351 FAM47AQ5JRC9 791 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 PPP4R3BQ5MIZ7 849 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 STK11IPQ8N1F8 1099 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 SLC44A5Q8NCS7 719 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 ZKSCAN3Q9BRR0 538 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.3□□□□□ -0.12
KIFC3-220ENST00000565351 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
KIFC3-220ENST00000565351 ZNF541Q9H0D2 1346 aa14.3□□□□□ -0.12
KIFC3-220ENST00000565351 STX6O43752 255 aa14.29□□□□□ -0.12
KIFC3-220ENST00000565351 FDPSP14324 419 aaKnown RBP14.29□□□□□ -0.12
KIFC3-220ENST00000565351 CACNB3P54284 484 aa14.29□□□□□ -0.12
KIFC3-220ENST00000565351 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
KIFC3-220ENST00000565351 PKP1Q13835 747 aa14.29□□□□□ -0.12
KIFC3-220ENST00000565351 CPLX2Q6PUV4 134 aaKnown RBP14.29□□□□□ -0.12
KIFC3-220ENST00000565351 CATIPQ7Z7H3 387 aa14.29□□□□□ -0.12
KIFC3-220ENST00000565351 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
KIFC3-220ENST00000565351 DNAJC18Q9H819 358 aa14.29□□□□□ -0.12
KIFC3-220ENST00000565351 NCOA5Q9HCD5 579 aaKnown RBP14.29□□□□□ -0.12
KIFC3-220ENST00000565351 GPRC5DQ9NZD1 345 aa14.29□□□□□ -0.12
KIFC3-220ENST00000565351 PTPDC1A2A3K4 754 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 JAK2O60674 1132 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 MYH8P13535 1937 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 CDC27P30260 824 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 ADD1P35611 737 aaKnown RBP14.28□□□□□ -0.12
KIFC3-220ENST00000565351 NBPF9Q3BBW0 867 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
KIFC3-220ENST00000565351 MICALL2Q8IY33 904 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 STK36Q9NRP7 1315 aa14.28□□□□□ -0.12
KIFC3-220ENST00000565351 RBM28Q9NW13 759 aaKnown RBP14.28□□□□□ -0.12
KIFC3-220ENST00000565351 H7C1D1 291 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 CPLX1O14810 134 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 GRIN3BO60391 1043 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 NMT2O60551 498 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
KIFC3-220ENST00000565351 TNNI2P48788 182 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 FUT2Q10981 343 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 TCP10Q12799 353 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 TNFAIP1Q13829 316 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 RTN1Q16799 776 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 SLC4A8Q2Y0W8 1093 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 MICU3Q86XE3 530 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.13
KIFC3-220ENST00000565351 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms